Marinovum algicola: MALG_00549
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Entry
MALG_00549 CDS
T03981
Name
(GenBank) DNA topoisomerase I, bacterial
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
malg
Marinovum algicola
Brite
KEGG Orthology (KO) [BR:
malg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
malg03032
]
MALG_00549
03400 DNA repair and recombination proteins [BR:
malg03400
]
MALG_00549
Enzymes [BR:
malg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MALG_00549
DNA replication proteins [BR:
malg03032
]
Prokaryotic type
DNA Topoisomerases
MALG_00549
DNA repair and recombination proteins [BR:
malg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MALG_00549
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Motif
Other DBs
NCBI-ProteinID:
AKO95744
LinkDB
All DBs
Position
complement(553161..556487)
Genome browser
AA seq
1108 aa
AA seq
DB search
MPVVVVESPAKAKTINKYLGSDYTVLASYGHVRDLPAKNGSVDPEADFEMKWEIGADSRK
HVKAIADALKDDNALILATDPDREGEAISWHLEEALRKRRAIKKDTPVSRVVFNAITKTA
VTEAMQNPRQVDAPLVEAYLARRALDYLVGFNLSPVLWRKLPGARSAGRVQSVCLRLIVE
REMEIEAFRPREYWSVKALLTTPRGQDYEARLTVHAGKKLDKYDLENETAAELAVQAVTS
RDLFVKSVEAKPATRNPSPPFMTSTLQQEASRKFGMGARQAMNAAQRLYEAGHITYMRTD
GIDMAPEAVGATRAAIKDRYGAEFVPDKARIYKNKAKNAQEAHECIRPTDMTKDMEALKL
RESDQARLYDLIWKRTMACQMESARLERTVVEIASQDGQVGLRANGQRIAFEGFLKVYEE
GRDDVAESDDDRILPQIMEGEPAKFAKSGLEGDYTKAGDSAPAVVETSGIQRNGKALLSE
NTAVLALQHHTQPPPRYTEATLVKKMEELGIGRPSTYASIVTTIQERGYVLKEKNRLIPE
DKGRIVTIFLLNFFRKYVGYEFTADLEEELDKVSAGEGDYKELLKRFWQDFSAAIAETSD
LRIAQVLDVLDEALSDQLYPPREDGTDPRICPKCGTGQLHLKTSQTGGFVGCGNYPECTY
TRPIAGEGADGEEKLLGEDQGDEIWLKAGRFGPYVQRGEPTPENKKPPRASLPKQKGQYV
PGWGPDDLTLEKAVTLLSLPREIGEHSEGGMIKSNFGRFGPYVMHQKPDEEKPVYVNLKD
PIEVFEIGMNHAVELLEHKRANPGRGRGRTAVKPLKELGDHPDGGPVNVMEGRYGPYVKW
EKVNATLPKDTEPKDVTMEMAVKLIEEKAGKSKKKAPAKKAAKKPAAKKGRRQGSRAEKR
PPPRKNNARLRRLRTAQSGRRPRNKSGARGRACPPHTPPVPAPAPGPRRRENPRAQNASG
PGSSPGREDAQAPPHTPPSRPPRRDLDTAKTLTHKTQVAPGQVQGARTRKPLHTPRPSRP
PRRDLDTAKTLAHKTRAAPDQVRGARTRKPLRTPHPSRPPRRDLAAAKTLAHKTRAVPDQ
VRGAGTRAALHSAPRCALSALTFTLANT
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atgccagttgttgttgtcgaatctccggccaaggccaagacaatcaacaaatatctcggc
tcggattacaccgttctggcgtcttatggccatgtgcgtgacctgcccgccaagaacgga
tcggtcgatcccgaggcggatttcgagatgaaatgggaaatcggcgccgacagccgcaag
cacgtcaaggcgatcgccgacgcgctcaaggacgacaatgcgctgatcctcgccaccgac
cccgaccgcgagggcgaggcgatttcctggcatctggaagaggcgctgcgcaagcgccgg
gcgatcaagaaggacacgccggtcagccgcgtggtgttcaacgcgatcaccaagaccgcc
gtcaccgaggcgatgcagaatccccgccaggtcgatgcgccgctggtcgaggcctatctc
gcccgccgggcgctggattaccttgtgggcttcaatctcagccccgtgctctggcgcaag
ctgcccggcgcgcgcagcgccggccgggtgcaatcggtctgcctgcggctgatcgtcgag
cgcgagatggagatcgaggcgttccggccgcgcgaatactggtcggtcaaggcgctgctc
accacgccgcgcggccaggactacgaggcccggctgacggtgcatgccggcaagaagctc
gacaaatacgacctggaaaacgagaccgccgccgagctcgcggtgcaggctgtcacctcg
cgtgatctcttcgtgaaatcggtcgaggccaaaccggccacccgcaacccctcgccgccc
ttcatgacctcgaccctgcaacaggaagccagccgcaagttcggcatgggcgcacgccag
gcgatgaacgcggcgcagcggctctacgaggcgggccatatcacctatatgcggaccgat
ggcatcgacatggcgcccgaggcggtcggcgccacccgcgccgcgatcaaggatcgctac
ggcgccgagttcgtgcccgacaaggcgcggatctacaagaacaaggccaagaacgcccag
gaagcccacgaatgcatccgccccacggacatgaccaaggacatggaggcgctgaaactg
cgcgagagcgaccaggccaggctctatgacctgatctggaagcggaccatggcctgccag
atggaaagcgcccggctcgagcgcacggtggtggaaatcgccagccaggacggccaggtc
gggctgcgcgccaatggccagcgcatcgccttcgaaggctttctcaaggtctacgaagaa
ggccgcgacgacgtggccgagagcgatgacgaccgtatcctgccgcagattatggagggc
gaaccggcaaagttcgccaaatccgggctggagggcgactacaccaaggccggcgacagc
gcccccgcagtggtcgagacctcgggcatccagcgcaacggcaaggcgctgctcagcgaa
aacaccgccgttctggccttgcagcaccacacccagccgccgccgcgttataccgaggcc
acgctggtgaaaaagatggaagagctcggcatcggccggccctcgacctatgccagcatc
gtcaccacgatccaggagcgcggctatgtgctcaaggagaagaaccggctgatccccgag
gacaagggccggatcgtcaccatcttcctgctgaatttcttccgcaaatacgtggggtat
gaattcaccgccgacctcgaggaggaactcgacaaggtttcggccggcgaaggcgactac
aaggaactgctcaagcgcttctggcaggatttctcggccgcgattgccgaaacctccgat
ctgcgcatcgcccaggtgctcgacgtgctcgacgaggcgctttccgatcagctctacccg
ccgcgcgaggatggcaccgatccgcggatctgtccgaaatgcggcaccggtcagttgcac
ctcaagacctcgcagaccggcggatttgtcggctgcggcaattatcccgaatgcacctac
acacggccgattgccggcgaaggcgcggatggcgaggaaaagctgctgggcgaggatcag
ggcgacgagatctggctgaaagccggtcgcttcggcccctatgtacagcgcggcgaaccg
acgcccgagaacaagaagccgccgcgcgcctcgctgcccaagcagaaaggccaatatgtg
cccggctgggggcccgatgacctgacgctggagaaggccgtgaccctgctcagcctgccg
cgcgagatcggcgaacattccgaaggtggcatgatcaagtcgaacttcggccgtttcggg
ccctatgtcatgcatcagaagccggacgaggaaaaaccggtctacgtcaatctgaaagac
ccgatcgaggtcttcgagatcggcatgaaccacgccgtggaactgctcgagcacaagcgc
gccaaccccggtcgcggccgcgggcgcaccgccgtcaagccgctgaaagagctgggcgat
caccccgacggcggtccggtcaacgtgatggaggggcgttacgggccgtatgtgaaatgg
gaaaaggtcaatgcgaccctgcccaaggacaccgagcccaaggacgtgaccatggagatg
gcggtcaagctgatcgaggaaaaggccggcaagagcaagaagaaggccccggcgaagaaa
gccgccaagaagcccgcggcaaaaaaaggccgccgccaaggaagccgcgccgaaaaaagg
ccgccgccaaggaagaataacgcccgcttacgcaggctcagaacggcgcagagcggccgg
aggccccggaacaagtccggggcgcgaggacgcgcatgccctccgcacaccccacccgtc
ccggcccccgcgccgggaccccgccgccgcgaaaaccctcgcgcacaaaacgcgagcggc
cccggatcaagtccggggcgcgaggacgcgcaagcccctccacacaccccaccgtcccgg
cccccgcgccgggacctcgacaccgcgaaaaccctcacgcacaaaacgcaagtggccccg
ggtcaagtccagggcgcgaggacgcgcaagcccctccacacaccccgcccgtcccggccc
ccgcgccgggacctcgacaccgcaaaaaccctcgcgcacaaaacgcgagcggccccggat
caagtccggggcgcgaggacgcgcaagcccctccgcaccccccacccgtcccggcccccg
cgccgggacctcgccgccgcgaaaaccctcgcgcacaaaacgcgagcggtcccggatcaa
gtccggggcgcggggacgcgcgcggctctccacagcgccccgcgttgtgccctttccgca
ctcacattcacgctcgcgaatacgtga
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