Marinovum algicola: MALG_01024
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Entry
MALG_01024 CDS
T03981
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family
KO
K03086
RNA polymerase primary sigma factor
Organism
malg
Marinovum algicola
Pathway
malg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
malg00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
MALG_01024
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
malg03021
]
MALG_01024
Transcription machinery [BR:
malg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
MALG_01024
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
Med21
STX6_10_61_N
KIP1
FlgN
Motif
Other DBs
NCBI-ProteinID:
AKO96215
LinkDB
All DBs
Position
1038231..1040213
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AA seq
660 aa
AA seq
DB search
MAAKDTDDQKTDAPEDVSLDMSQAAVKKMIGEARERGYITYDQLNSVLPPDQVSSDQIED
VMSMLSEMGIQVTEEDEDAEEDDNKGATDLVETKKPGEVALSSGGTEKLDRTDDPVRMYL
REMGSVELLSREGEIAIAKRIEAGRKTMIAGLCESPLTFQAITIWRDELLSEDILLRDVI
DLETTFSGQLDEEGGVEEPVVEAANVATAPKKDTGPELDADGNPIAKDDDEDEDEQANMS
LAAMETALKPQVLETLDRIAEDYARLSEMQDSRISATLNEDGTFSADEEAIYQQLRSEIV
ELVNELHLHNNRIEALIDQLYGINRRIMSIDSSIVKLADQARINRREFVEAYRGYELDPS
WLERMAEKPGRGWQMFIERSADKVEEYRTEMAQVGQYVGLDIPEFRRIVGQVQKGEKEAR
QAKKEMVEANLRLVISIAKKYTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATW
WIRQAITRSIADQARTIRIPVHMIETINKLVRTGRQMLHEIGREPTPEELAEKLQMPLEK
VRKVMKIAKEPISLETPIGDEEDSQLGDFIEDKNAVLPLDSAIQENLKETTTRVLSSLTP
REERVLRMRFGIGMNTDHTLEEVGQQFSVTRERIRQIEAKALRKLKHPSRSRKLRSFLDQ
NT seq
1983 nt
NT seq
+upstream
nt +downstream
nt
atggccgccaaagacaccgacgatcagaagaccgacgccccagaagacgtgtccctcgac
atgagccaggcggcggtcaagaagatgatcggcgaagcgcgcgagcgtggatatatcacc
tacgaccagctgaattcggtgctgccgcccgatcaggtctcgtccgaccagatcgaggac
gtgatgtcgatgctgtcggagatgggcatccaggtcaccgaagaagacgaagacgccgag
gaagacgacaacaagggcgcgaccgatctggtcgagaccaagaagccgggcgaggttgcg
ctctcttccggcggcaccgaaaagctggaccggaccgatgacccggtgcgcatgtacctg
cgcgaaatgggttcggtcgaactgctctcgcgcgagggtgagatcgcgattgccaagcgc
atcgaggccggccgcaagaccatgatcgccgggctctgcgaaagcccgctgactttccag
gcgatcaccatctggcgcgacgaacttctctcggaagacattctgctgcgcgacgtgatc
gatctcgagaccaccttctcgggccagctcgacgaagagggcggcgtcgaggagccggtg
gtcgaggccgccaatgtcgcgaccgcgccgaaaaaggacaccggccccgagctcgacgcc
gacggcaatccgatcgccaaggacgacgacgaggacgaggacgagcaggccaacatgtcg
ctggccgcgatggaaaccgcgctcaagccgcaggttctcgaaacgctcgaccgcatcgcc
gaggattatgcccgcctgtcggaaatgcaggacagccggatttccgccacgctgaacgaa
gatggcacgttctcggcggatgaagaggcgatctatcagcagcttcggtccgagatcgtc
gaactggtcaacgagctgcacctgcacaacaaccggatcgaggcgctgatcgaccagctc
tacggcatcaaccgccggatcatgtcgatcgacagctcgatcgtgaaactggccgaccag
gcgcgcatcaaccggcgcgaattcgtcgaggcctatcgcggctatgagctcgatccctcc
tggctcgagcggatggccgaaaagcccggtcgcggctggcagatgttcatcgaacgctcg
gccgacaaggtcgaggaataccgcaccgaaatggcgcaggtcggccaatatgtcggtctc
gacattcccgaattccgccgcatcgtcggccaggtgcagaagggcgagaaagaggcccgc
caggccaagaaggaaatggtcgaggcgaacctgcgtctggtgatctcgattgccaagaaa
tacaccaaccgcgggctgcaattccttgatctcattcaggaaggcaacatcggcctgatg
aaggccgtcgacaagttcgaataccgccgcggctacaagttctcgacctacgccacctgg
tggatccgtcaggcgatcacccggtcgatcgcggatcaggcgcgcaccatccgtatcccg
gtgcacatgatcgagacgatcaacaagctggtgcgcaccggccgccagatgctgcacgag
atcggccgcgaaccgacgcccgaggaactggccgagaagctgcaaatgccgctcgaaaag
gtccgcaaggtgatgaagatcgccaaggagccgatctcgctggagacccccatcggtgac
gaggaagacagtcagcttggcgatttcatcgaggacaagaacgccgtcctgccgctcgac
agcgccattcaggagaacctgaaggaaaccaccacccgcgtgctgtcgtcgctgacgccg
cgcgaggaacgggtgctgcggatgcgctttggcatcggcatgaacaccgaccacacgctg
gaagaggtcggccagcagttctcggtcacccgcgaacggatccgtcagatcgaagcgaaa
gcgctgcgcaagctcaagcacccgagccggtcgcgcaagttgcgttcgttcctcgatcag
taa
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