Marinovum algicola: MALG_02330
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Entry
MALG_02330 CDS
T03981
Name
(GenBank) Superfamily II DNA and RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
malg
Marinovum algicola
Pathway
malg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
malg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MALG_02330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
malg03019
]
MALG_02330
03009 Ribosome biogenesis [BR:
malg03009
]
MALG_02330
Enzymes [BR:
malg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MALG_02330
Messenger RNA biogenesis [BR:
malg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MALG_02330
Ribosome biogenesis [BR:
malg03009
]
Prokaryotic type
rRNA helicases
MALG_02330
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
AKO97494
LinkDB
All DBs
Position
complement(2405624..2407687)
Genome browser
AA seq
687 aa
AA seq
DB search
MIQTLSDALSERGYDTLTPVQTAVTDPELASSDLLVSAQTGSGKTVGFGLAIGPTLLDET
GRFGPAAAPLALIIAPTRELAFQVSRELTWLYEKAGVRMATCVGGMDMRDERRTLERGAH
IVVGTPGRLRDHIQRGSLEMGDLRAVVLDEADEMLDLGFREDLEFMLGEAPEERRTLLFS
ATVPPMIVKLAQNYQRDAVRVTTLAEKGQHADIAYQALRVAPQDAENAIINVLRYHDAQN
AIVFANTRATVNRLTARFANRGFSVVCLSGELSQSERTHALQAMRDGRARVCVATDVAAR
GIDLPNLELVVHAELPSNYENLLHRSGRTGRAGRKGVSALIVPPKVTKKAERLLKMAKVT
AEWTEAPGADEILRRDEERLLADPTWAEEIKPDEADFAARLLDLHSPEVIAAAYLRLARS
RYSAPEDLSDPNTRPERKERKPFGPSTWVALSVGRDDRAEARWILPLLCRAGGLDKDAIG
AIRVQQNETFVELTEAVAPGFLTNLGAGNVLDENITVRPAEAPPQGPRPPRDDRGPGKPR
PKRDFDGPRPKRDFDAPRPTRDEASKPRPAPKPYKPVDPETHAPAKKRGKSADAPRGDDK
PRDFDKAPKHRGDKSGKPFKPGGKPGGKPAGKPAPGKALAGRVPGGKGPGKPAKPRANAS
DTSKRFTPPGKSAGPRKGGNQPPRRKP
NT seq
2064 nt
NT seq
+upstream
nt +downstream
nt
atgatccagaccctgtccgatgcgctttccgagcgtggctatgacacgttgaccccggtg
cagacggcagtcaccgacccggagctggccagttccgaccttctcgtttcggcccagacc
ggctcgggcaagacggtgggcttcggcctcgccatcggtccgacgctgctggacgagacg
ggccgctttggtcccgccgcggcgccgttggcgctgatcatcgcgccgacccgcgaattg
gcctttcaagtcagccgcgagctgacctggctgtatgaaaaggccggtgtgcggatggca
acctgtgtcggcggcatggatatgcgcgacgaacgccgcacgctggagcgcggtgcgcat
atcgtcgtcggcaccccgggccggctgcgcgaccacatccagcgcggctcgctcgagatg
ggcgacctgcgcgcggtggttctggacgaggccgacgagatgctcgacctcggcttccgc
gaggacctcgaattcatgctcggcgaggcgccggaagagcgccgcacgctgctgttctcg
gccacggtgccgccgatgatcgtcaagttggcgcagaattaccagcgcgacgccgtgcgc
gtcaccaccctggcagaaaagggccagcacgccgatatcgcctatcaggcgctgcgggtg
gcgccgcaggatgcggaaaacgccatcatcaacgtgctgcgctatcacgacgcccagaac
gccatcgtctttgccaatacccgcgccacggtgaaccggctgaccgcgcgctttgccaac
cgcggcttttccgtggtctgcctgtcgggcgagctgagccagagcgagcgcacccatgcg
ctccaggcgatgcgggacgggcgggcgcgggtctgcgtggcgaccgatgtggcggcgcgc
ggcatcgacctgcccaatctcgaactggtggtgcatgccgagctgccgtcgaactacgag
aacctgctgcaccgctcgggccgcaccggccgcgccgggcgcaagggcgtctcggcgctg
atcgtgccgccgaaggtgacgaagaaggctgagcgtctgctcaagatggccaaggtcacc
gccgaatggaccgaggcccccggcgccgacgagatcctgcgccgcgacgaagagcggctt
ctggccgatccgacctgggccgaggagatcaagcccgacgaggctgatttcgccgcccgc
ctgctggatctgcacagtcccgaggtgatcgccgccgcctatctgcggctggcgcggtcg
cgctattccgcgcccgaagacctctccgatcccaacacccgccccgagcgcaaggagcgc
aagcccttcggtcccagcacctgggtcgcgctctcggtgggccgcgatgaccgggccgag
gcgcgctggattctgccgctgctctgccgcgccggcgggctcgacaaggacgcgatcggc
gccatccgggtgcagcagaacgagaccttcgtcgagctgaccgaagccgtggctcccggc
ttcctgaccaatctcggcgcgggcaacgtgcttgacgagaatatcaccgtgcgtccggcc
gaggcgccgccgcaaggtccgcgcccgccacgcgatgaccgcgggccgggcaaaccgcgc
ccgaaacgcgatttcgacgggccgcgcccaaagcgcgacttcgacgcgccgcgcccgacg
cgggacgaggcatcgaagccgcgcccggcgccgaaaccctacaaacccgtcgatcccgaa
acccatgccccggcgaagaaacgcggcaaatcggcggatgcgccgcgcggtgacgacaag
ccgcgcgatttcgacaaggcgccgaaacaccgtggcgacaagtcgggaaaaccgttcaag
ccgggtggcaaacccggcggcaaaccggccggaaaaccggcgccgggcaaggccttggca
ggccgtgttcccggcggcaaagggccgggcaagccggccaagccgcgcgccaatgcctcg
gacacctccaagcgcttcaccccgccgggtaaatccgcaggccctcgcaagggcggcaac
cagccgccgcgtcgcaagccctaa
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