Marinovum algicola: MALG_03194
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Entry
MALG_03194 CDS
T03981
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
malg
Marinovum algicola
Brite
KEGG Orthology (KO) [BR:
malg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
malg03016
]
MALG_03194
Enzymes [BR:
malg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
MALG_03194
Transfer RNA biogenesis [BR:
malg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
MALG_03194
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
CNOT1_HEAT
LytR_cpsA_psr
Motif
Other DBs
NCBI-ProteinID:
AKO98338
LinkDB
All DBs
Position
complement(3260845..3261456)
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AA seq
203 aa
AA seq
DB search
MAHHLYQRDLPEDLDLGPVVAVDCETMGLHPHRDRLCVVQLSSGDGTAHLVQITRGQTEA
PNLCRLLADPAVLKLFHFGRFDIAALDNAFGTLAAPVYCTKIASKLIRTYTDRHGLKHLL
QELLGVDISKQQQSSDWGAAELTKAQIDYAASDVLYLHRLREVLDQRLAREGRSEMAQAC
FDFLPARARLDLAGWPDQDIFAH
NT seq
612 nt
NT seq
+upstream
nt +downstream
nt
atggcacatcacctttaccagcgcgacctgcccgaggatctcgatctgggccctgtcgtc
gccgtggactgcgaaaccatgggcctgcatccgcaccgcgaccggctttgcgttgttcag
ttgtcatctggcgacggcacggcgcatctggttcagatcacaaggggccagaccgaggcc
cccaatctctgccgcttgctggccgatccggcggttctcaagctctttcatttcggccgc
ttcgacatcgccgcgctcgacaatgccttcggcacgctcgccgcaccggtctattgcacc
aagatcgccagcaagctgatccgcacctacaccgaccggcacgggctgaagcatctgctg
caagagctgctgggcgtcgatatctcgaaacagcagcaatcgagcgattggggcgcggcc
gagctgaccaaggcgcagatcgactatgcagcgtcggatgtgctgtacctgcatcggctg
cgcgaggtgctcgaccagaggctcgcccgcgagggccgcagtgaaatggcacaggcctgc
ttcgatttcctgcccgcccgcgcccggctggatctcgctggctggcccgatcaggatatc
tttgcccattga
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