Marinovum algicola: MALG_03389
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Entry
MALG_03389 CDS
T03981
Name
(GenBank) DNA-directed DNA polymerase III (polc)
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
malg
Marinovum algicola
Pathway
malg03030
DNA replication
malg03430
Mismatch repair
malg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
malg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MALG_03389
03430 Mismatch repair
MALG_03389
03440 Homologous recombination
MALG_03389
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
malg03032
]
MALG_03389
03400 DNA repair and recombination proteins [BR:
malg03400
]
MALG_03389
Enzymes [BR:
malg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MALG_03389
DNA replication proteins [BR:
malg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MALG_03389
DNA repair and recombination proteins [BR:
malg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MALG_03389
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Scaffold
OB_MCM10
Motif
Other DBs
NCBI-ProteinID:
AKO98533
LinkDB
All DBs
Position
complement(3458401..3461877)
Genome browser
AA seq
1158 aa
AA seq
DB search
MRLKKLPGLCAEMGMPALAVTDSNNLFCALEFSVGAQAAGVQPIMGCQVDVAYVALNPGD
KPVDPAAVVLLAQNERGYENLMKLNTCLYVDKGGQVPQVTLKELAANAEGLICLSGGPDG
PVGRLLRRGQRPAAEALMERLKGIYGDRLYVELQRHPGESGLPEDEARSERGFVEMAYAM
ALPLVATNDVYFPKPEMYEAHDALICIAEGAYVDQQDARRRLTREHYFKSPQEMATLFAD
LPEALENTVEIAQRCAFGCYRRDPILPKFADDEVAELRRMANQGLQARLAVIPHAVSVED
YQKRLDFELGIIEGMGFPGYFLIVADFIQWAKDNDIPVGPGRGSGAGSLVAYALTITDLD
PLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIRYVQEKYGRDKVGQIITFGALLSKA
AVRDIGRVLQMPYGQVDRLSKMIPVEGVKPVSIEKALQDEPRLREEARNEEVVDRLLTYG
QQVEGLLRNASTHAAGVVIGDRPLDALVPLYQDPRSDMPATQFNMKWVEQAGLVKFDFLG
LKTLTVIQNAMDLVFKSGRPLHVSAGGVELYEPAEGAENQINAIPLDDEATYKLYAAAKT
VAVFQVESSGMMDALKRMKPTCIEDIVALVALYRPGPMENIPVYCEVKNGLREITSVHPL
IDYILEETQGIIVYQEQVMQIAQVMAGYSLGGADLLRRAMGKKIKEAMDAERPKFEKGAA
ENGVEKKKATEVFDLLEKFANYGFNKSHAAAYAVVSYQTAWLKANHPVEFMAGVMNCDIH
LTDKLATYFEEVRKGLGLPWVPPCVNRSQASFDVVDGALVYALGALKNVGLEAMKLVVEG
RQDLGHEAPDQARGAKEKPFATLYDFARRVDLKRVGKRPLEMLARAGAFDQLDPNRRRVF
ESLDALVNYSAAVHEQKNSNQVSLFGEAGDDLPEPRLAPVNDWLPAERLAEEFKAVGFYL
SGHPLDDYMASLKRKDVMTLDEVMAKAERSPCVAKLAGVVAGRQERKSARGNRFAFCQLS
DTTGAYEVTLFSETLEKSREHLETGAKVVVTVEATMESDQLKLLGRSVAPIDAAVADAGT
IGLKVFVEEPGAIPSVATILSEAAGRVQKAARGPIFLYLMDPALPGEVEIDTGAEFPVNP
EIKGALKSLPGVMAVEEV
NT seq
3477 nt
NT seq
+upstream
nt +downstream
nt
atgcggctcaagaagctgccgggcctttgtgccgagatgggcatgccggcgctggcggtg
accgacagcaacaacctgttctgcgcgctggaattctcggtcggtgcccaggctgccggg
gtgcagccgatcatgggatgtcaggtcgatgtggcctatgtggcgctcaacccgggcgac
aagccggtggacccggcggcggttgttcttctggcgcagaacgaacgcggctacgagaac
ctgatgaagctcaacacctgcctgtatgtcgacaagggcgggcaggtgccgcaggtgacg
ctgaaggagctggcggccaatgccgaggggttgatctgcctgtcgggcgggccggacggg
ccggtggggcggctgctccggcgcggccagaggccggcggccgaggcgctgatggagcgg
ctcaaggggatctacggcgacaggctttatgtcgagctgcaacgccatcccggcgaaagt
ggattgccggaggacgaagcgcggtcagagcgcggctttgtcgagatggcctatgcgatg
gcgctgccactggtggcgaccaacgatgtctattttcccaagcccgagatgtacgaggcg
catgatgcgctgatctgtatcgccgagggggcctatgtcgatcagcaggacgcccggcgg
cggctgacgcgggagcattatttcaaatcgccgcaggaaatggcgacgctctttgccgat
ctgcccgaggcgctggagaacaccgtcgagatcgcgcagcgctgtgctttcggctgctat
cgccgcgacccgatcctgccgaaattcgccgatgacgaggtggccgaactgcgccgcatg
gccaaccaggggttgcaggcccgtctggcggtgatcccgcatgcggtttcggtcgaggac
taccagaagcggctagatttcgagctcggtatcatcgagggcatggggtttcccgggtat
ttcctgatcgttgccgatttcatccagtgggccaaggacaacgacattccggtggggccg
gggcgggggtcgggcgccggcagcctcgtggcctatgcgctgaccatcaccgaccttgac
ccgctgcgctattcgctgctgttcgaacgcttcctcaaccccgagcgggtcagcatgccc
gacttcgacatcgacttctgcatggatcgccgcgaagaggtgatccgttacgtgcaggag
aaatacggccgcgacaaggtggggcagatcatcaccttcggtgcgctgctgtcgaaggcg
gcggtgcgcgacatcggccgggtgttgcagatgccctatggccaggtcgaccgcctgtcc
aagatgatcccggtcgagggggtcaagccggtctcgatcgagaaggccttgcaggatgag
ccgcggctgcgtgaagaggccaggaacgaagaggtggtcgaccggcttctgacctatggc
cagcaggtcgaggggcttttgcgcaacgcctcgacccacgccgccggggtggtgatcggc
gaccggccgctggatgcgctggtgccgctctatcaggatccgcgctcggacatgccggcg
acccagttcaacatgaaatgggtcgaacaggccgggttggtgaagttcgactttctgggc
ctcaagaccctgacggtgatccagaacgccatggacctggtgttcaaatccggtcggccg
ctgcatgtctcggccgggggcgtcgaactctacgagccggccgagggcgccgagaaccag
atcaacgccatcccgctcgatgacgaggcgacctacaagctttatgccgccgccaagacc
gtcgccgtgttccaggtggagagctcgggcatgatggatgcgctcaagcggatgaaaccg
acctgcatcgaggacatcgtcgcgctggtggcgctctatcgtcccggcccgatggagaac
atcccggtctattgcgaggtcaagaacgggctgcgcgagatcacctcggtgcatccgctg
atcgattatattctggaagagacccaggggatcatcgtctatcaggagcaagtgatgcag
atcgcccaggtcatggcgggctattcgcttggcggcgccgacctgttgcgccgcgccatg
ggcaagaagatcaaggaggcgatggacgccgaacggccgaagttcgaaaagggcgcggcg
gaaaacggtgtcgaaaagaagaaggccaccgaggtcttcgacctgttggagaaattcgcc
aactacgggttcaacaagtcgcacgcggcggcctatgcggtggtcagctaccagaccgcc
tggctcaaggcgaaccacccggtggagttcatggccggggtgatgaactgcgatattcat
ctgaccgacaagctcgccacttatttcgaggaggtccgcaagggcctcggcctgccctgg
gttccgccctgcgtgaaccgttcgcaggccagcttcgacgtggtcgacggcgcgctggtc
tatgcgctgggcgcgttgaagaacgtcgggctggaggcgatgaagctggtggtcgaaggc
cgtcaggaccttggccatgaggccccggatcaagcccggggcgcgaaggaaaaacccttt
gccacgctctacgattttgcccgtcgcgtcgatctcaagcgggtcggcaagcggccgctg
gagatgctggcgcgggccggggcctttgatcagctcgatcccaaccgccgccgggtcttc
gaatcgctcgatgcgctggtgaattattcggcggcggtgcacgagcagaagaactcgaac
caggtgtcgctctttggcgaggccggcgacgatctgcccgagccgcgtctggcgccggtg
aacgactggctgcccgccgagcggctggccgaggagttcaaggcggtggggttctatctc
tcgggccatccgctcgacgattacatggcctcgctcaagcgcaaggacgtgatgaccctc
gacgaggtcatggccaaggccgaacgcagcccctgcgttgccaagctggccggcgtcgtc
gccgggcggcaggagcggaaatcggcgcgcggcaaccgctttgccttttgccagctttcc
gacaccaccggcgcctatgaggtcacgctgttttcggaaacgctggagaaatcgcgcgaa
catctcgagaccggggccaaggtggtggtgacggtcgaggcgacgatggagagcgatcag
ctcaagctgctgggccggtcggtggcgccgatcgacgcggcggtggcggatgccggcacg
atcggcctcaaggtctttgtcgaggaaccgggggcgattccctcggtcgccaccatcctt
tccgaggcggcgggcagggtgcaaaaggcggcgcggggcccgatctttctctacctgatg
gacccggccctgcccggcgaggtcgagatcgacaccggtgcggaatttccggtgaacccg
gaaatcaagggcgcattgaagagcctgccgggggtgatggcggtggaagaggtctag
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