Marinovum algicola: MALG_03511
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Entry
MALG_03511 CDS
T03981
Name
(GenBank) double-strand break repair protein AddB, alphaproteobacterial type
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
malg
Marinovum algicola
Brite
KEGG Orthology (KO) [BR:
malg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
malg03400
]
MALG_03511
Enzymes [BR:
malg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MALG_03511
DNA repair and recombination proteins [BR:
malg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
MALG_03511
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
AKO98654
LinkDB
All DBs
Position
3594994..3597915
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AA seq
973 aa
AA seq
DB search
MFERLAAPRVFGLPPGVDFPQALVDGLLARCQGQPPEALARVELIVNTERMRRRIRAIFD
AGPPRILPRIRVLSEVEPPWTAEIPEPVAPLQRRLELVQLVSGLLEAQPDMAPRAALFDL
ADSLAGLMDEMQGEGVTPADIEALDVTDQSGHWQRARDFLAIVQQFFDPETDAPDGTARL
RMISEALAQHWQSDPPEHPVILAGSTGSRGAASALMRAVAHLPQGALVLPGFDFDMKPAN
WAALDQALVSEDHPQYRFAKLMRALERGPEDVHHWHRIAAPCPPRNRLISLALRPAPVTD
AWLAEGPKLSELDRACADVTLIEAQSRREEALTIALRLRQAAETGQSAALITPDRQLTRQ
VTATLDRWGIIPDDSAGIPLQLTAPGRFLRHVAALFAAPLDAPALLTLLKHPLCHSGEGR
NDHLRLTRDLELHLRRHGPPFPDAAMLTRFAEDRKAPDWSAWLVRLCGQDGRGPLPLTEW
LARHRTLAEALAAGHTRDGAGNLWVQVAGIETLALVRKLEEAAPHGGTLSARDYVDLFGA
VLGREEQRDRDLGHPHIRIWGTLEARVMGADLLILGGLNEGSWPEPPTPDPWLNRVLRDK
AGLLLPERRIGLSAHDFQQAVGAREVWLTRAVRSDDAETVPSRWLNRLTNLLRGLGNTGR
EAHAGMQARGQSWLALAHAVEKVTPAAPAPRPSPKPPAEARPKQLSVTEIKRLIRDPYAI
YAKHVLRLRPLDSLAKAPDALLRGIIAHKVLEDFVDASVKHPDRLSRAELLATTAQVLDA
QVPWPSARAMWQARMARVADGFIADETERQAEALPIRFEVKGGRDIPRLGFRLTCEADRI
DRAREDGRLLLYDYKTGKPPGPAEQKHFDKQLLLEAAVAEAGGFEGLAPAQVARAVYLGL
GSSPENREAPLAEAPPAAVWAQFETLIARYMDDTQGFTARRAMQKAGDVGDYDQLARFGE
WELTDLPDARPVP
NT seq
2922 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagcgcctcgccgccccccgcgtctttggcctgccccccggggtggattttccc
caggcgctggtggatgggcttctggcgcggtgccagggtcagccgccagaggcgctggcg
cgggtcgagctgatcgtcaacaccgaacgcatgcgccgccgcatccgcgcgatctttgat
gccggcccgccccgcatcctgccccgaattcgcgtgctttccgaggtcgagccgccctgg
accgccgagatccccgaaccggtcgcgccgctgcaacgccggctggagctggtgcagctg
gtctccggcctgctcgaggctcagcccgacatggccccgcgcgccgcgctgtttgatctg
gcggactcgctggccgggctgatggacgagatgcagggcgaaggcgtgacccccgccgat
atcgaggcgctcgacgtcaccgaccaatccggccactggcagcgcgcccgcgatttcctg
gcgatcgtgcagcaattcttcgatcccgagaccgacgcgccggatggcaccgcgcggctg
cggatgatctccgaggcgctggcgcagcattggcagagcgatccgccggagcatccggtg
atcctcgctggctcgaccggctcgcgcggggcggcctcggcgctgatgcgggcggtggcg
catctgccgcagggcgcgctggtgttgccgggcttcgatttcgacatgaaaccggccaat
tgggcggcgctggaccaggcgctggtctccgaagaccacccgcaataccgctttgccaag
ctgatgcgcgcgctggagcgtggccccgaggatgtgcaccactggcaccggatcgccgcc
ccctgcccgccacgcaaccggctgatttccctggcgcttcgcccggctccggttaccgac
gcctggttggccgaaggcccgaagctcagcgagttggaccgtgcctgcgcggatgtcacc
ctgatcgaggcgcaaagccggcgggaggaggcgctgaccatcgcgctgcgtctgcgtcag
gccgccgaaaccggccagagcgccgcgctgatcacccccgaccgtcagcttacccggcag
gtcaccgccacgctcgaccgctggggcatcatccccgacgacagcgccggcatcccgctg
caactgaccgcgccgggccgattcctgcggcatgtggcggcgctattcgccgcgccgctg
gatgcgccggcgctgctgacgctcttgaaacacccgctctgccattccggcgagggccgc
aacgatcacctgcggctgacccgcgatctggagctgcacctgcgccgccatggcccgccc
ttccccgatgcggcgatgctcacgcgctttgccgaggaccgcaaggcgccggactggagc
gcctggctggtgcggctctgcgggcaggacgggcgggggccgctgccgctcaccgagtgg
ctggcgcgacaccgtacgctggccgaagcgctggcggcggggcacacgcgggacggcgcc
ggcaatctctgggtgcaggtcgccggcatcgagaccctggcactggtgcgcaagctggaa
gaggccgcgccgcatggcggcacgctctcggcgcgcgattacgtcgatctcttcggcgcg
gtgctcgggcgcgaggaacagcgcgaccgcgacctcggccatccgcatatccgcatctgg
ggcacgctcgaggcccgcgtcatgggcgccgatctgctgatcctcggcgggctgaacgaa
ggctcctggccggagccgccaacgcccgacccctggctcaaccgggtgctgcgcgacaag
gcggggctcttgctgcccgagcggcggatcggcctttcggcgcatgatttccaacaggcg
gtcggcgcacgcgaggtctggctgacccgcgcagtacgctctgacgatgccgaaaccgtg
ccctcgcgctggctcaaccggctgaccaacctgctgcgcgggctgggcaataccgggcgc
gaggcccatgccggcatgcaggcgcgcggccagtcgtggctggcgctggcccatgccgtc
gaaaaggtcactcccgccgccccggcgccgcgcccctcgccgaaaccgcccgccgaggca
cgaccgaaacagctctcggtgaccgagatcaagcggctgatccgcgatccctatgcgatc
tatgccaaacacgtgctgcgcctgcgcccgctcgacagcctggccaaggcgcccgacgcg
ctgttgcgcggtatcatcgcgcacaaggtgctggaagatttcgtcgacgccagcgtgaaa
cacccggacaggctcagccgggccgagcttttggcgaccaccgcccaggttctggacgcg
caggtgccctggccttcggcgcgggcgatgtggcaggcgcggatggcgcgggtggccgat
ggcttcatcgcggacgagaccgaaaggcaggccgaggcgctgccgatccgcttcgaagtc
aagggcggccgcgacattccgcgcctgggcttccgtctgacctgcgaggccgaccgcatc
gatcgggcgcgcgaggacgggcggctgctgctctatgattacaagaccggcaagcccccc
ggcccggccgaacagaaacatttcgacaagcaactgctgctcgaggcggcggtggccgag
gccggcggcttcgaggggctggcgccggcacaggtcgcgcgcgcggtctatctcggcctc
ggctccagcccggaaaaccgcgaggcgccgctggccgaggcgccgcccgccgccgtctgg
gcacagttcgagacgctgatcgcgcgctacatggacgacacccagggctttaccgcgcgc
cgcgccatgcaaaaggccggtgacgtcggcgattacgaccagcttgcgcgctttggcgaa
tgggagctgaccgacctgcccgatgcgaggcccgtgccatga
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