Marinovum algicola: MALG_03584
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Entry
MALG_03584 CDS
T03981
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
malg
Marinovum algicola
Pathway
malg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
malg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MALG_03584
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
malg03021
]
MALG_03584
03019 Messenger RNA biogenesis [BR:
malg03019
]
MALG_03584
Transcription machinery [BR:
malg03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MALG_03584
Messenger RNA biogenesis [BR:
malg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MALG_03584
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
S1CSD-TOTE-2
AAA_22
AAA_25
OB_RNB
ATPase_2
AAA
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
AKO98727
LinkDB
All DBs
Position
complement(3672859..3674130)
Genome browser
AA seq
423 aa
AA seq
DB search
MTEDHLNLADLKAKSPKDLLAMAEELEIENASTMRKGEIMFQILRERADEGWKVSGDGVL
EVLQDGFGFLRSPEANYLPGPDDIYVSPTMIRKFSLRTGDSIEGEISAPDDNERYFALVN
VTAINFEDPERAKHKIAFDNLTPLYPDERLKMEIEDPTIKDRSARVIDLVAPIGKGQRSL
IVAPPRTGKTVLLQNIASSIEKNHPECYLIVLLIDERPEEVTDMQRSVKGEVISSTFDEP
AQRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAYNTVVPSSGKVLTGGVDANALQ
RPKRFFGAARNIEEGGSLTIISTALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRVF
PAIDILKSGTRKEDLLIEKLDLQKTFVLRRILNPMGTTDAVEFLLSKLKQTKTNSEFFDS
MNT
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagaccacctgaaccttgccgatctcaaggcgaaaagccccaaagaccttctt
gcgatggcagaagagctcgagatcgagaacgcctcgaccatgcgcaagggcgagatcatg
ttccagatcctgcgcgaacgcgcggacgaaggctggaaggtgtccggcgatggcgtgctc
gaggtgctgcaagacgggttcggcttcctgcgctcgccggaagccaactatctgccgggg
ccggacgacatctatgtctctccgacgatgatccgcaaattctcgctgcgcaccggcgat
tcaatcgaaggcgagatctcggccccggatgacaatgaacgctatttcgcgctggtgaat
gtcaccgcgatcaactttgaagatcccgagcgggcgaaacacaagatcgcctttgacaac
ctgacgccgctctatcccgacgagcggctgaagatggagatcgaggatccgaccatcaag
gaccgttcggcccgggtgatcgatctggttgcgccgatcggcaagggccagcgttcgctg
atcgtggcgccgccgcggaccggcaagaccgtgctgttgcagaacatcgccagcagcatc
gaaaagaaccatccggaatgctatctgatcgtcctgctgatcgacgagcggccggaagag
gtgaccgacatgcagcgttcggtcaagggcgaggtgatctcctcgacctttgacgaaccg
gctcagcgccacgtggcggtgtcggaaatggtgatcgaaaaggccaaacggctggtcgaa
cacaagcgcgacgtggtgatcctgctcgattccatcacccgcctcggccgcgcctacaac
accgtcgtaccgtcctccggcaaggtgctgaccggcggtgtcgacgccaacgcgttgcaa
cggccgaaacgcttctttggtgccgcgcgcaacatcgaagagggcggctcgctgaccatc
atctcgaccgcgctgatcgacaccggcagccggatggacgaggtgatctttgaagaattc
aagggcaccggcaactccgagatcgtgctcgaccgcaaggtggcggacaagcgcgtcttc
ccggcgatcgacatcctgaaatccggcacccgcaaagaggacctgctgatcgagaaactc
gatcttcagaagaccttcgtgctgcggcggatcctcaacccgatggggacgacggatgcg
gtggaattcctgctgtcgaagctgaagcagaccaagaccaactcggaattcttcgattcc
atgaacacctga
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