Pseudoduganella albidiflava: EYF70_00915
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Entry
EYF70_00915 CDS
T05903
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mali
Pseudoduganella albidiflava
Pathway
mali03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mali00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EYF70_00915 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mali03019
]
EYF70_00915 (pcnB)
Enzymes [BR:
mali01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
EYF70_00915 (pcnB)
Messenger RNA biogenesis [BR:
mali03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
EYF70_00915 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
DUF2204
Motif
Other DBs
NCBI-ProteinID:
QBH99561
LinkDB
All DBs
Position
complement(218418..219923)
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AA seq
501 aa
AA seq
DB search
MIKKFIRKILGVKDAPNSSEPEILGPEQHGIDPKMVSSNAVRVTSTLQEAGFEAFVVGGA
VRDLLLGVKPKDFDIATNATPEQVKKLFRRAFIIGRRFQIVHVMFGQDLLEVTTFRGSAI
DNAPKDEHGRVLRDNTFGSQAEDAERRDFTINAMYYNPATQQVLDYHGGIRDIRAKLLRI
IGQPETRYREDPVRMLRVVRFAAKLRFEIEPTTNAPIAVMAPLINNVPAARVFDEMLKLL
MSGSALACLLQLRKAGLHHGLLPLLDVVLEQPLGFKFVTLALEATDKRIASGKTVSPGFL
FASLLWHQVLEKWNAYQASGEFPIPALHIAADEVLESQTEKLALQRKIGSDMRDIWAMQP
RFERRNGKNPYKLLEHVRFRAGYDFLLLRCASGEIEQELGDWWSAFYEADETVRAEMVTA
ISSGGAASKRKRAPRRGTRHEEGAEAVEASDDDGFDGDELHAEGEHEGDTAAAPKRRRRG
PRRKRGEGGAPDTAPTTPTID
NT seq
1506 nt
NT seq
+upstream
nt +downstream
nt
atgattaagaaattcatccgcaagatcctgggcgtcaaggatgcccccaacagcagcgaa
cctgaaatcctgggcccggagcagcacggcatcgacccgaaaatggtgtcgtcgaatgcg
gtccgcgtcacttccacgctgcaggaagcgggcttcgaggccttcgtggtgggcggcgcc
gtgcgcgacctgctgctgggcgtgaagcccaaggacttcgacatcgccaccaacgccacg
cccgagcaggtcaagaagctgttccgccgcgccttcatcatcggccgccgcttccagatc
gtgcacgtgatgttcgggcaggacctgctggaagtgaccaccttccgcggcagcgccatc
gacaacgcgccgaaggatgaacacggccgcgtgctgcgcgataacaccttcggcagccag
gccgaggatgcggagcgccgcgacttcaccatcaacgccatgtactacaacccggccacc
cagcaggtgctcgattaccacggcggtatccgcgatatccgcgccaagctgctgcgcatc
atcggccagccggaaacgcgctaccgggaagacccggtgcgcatgctgcgcgtggtgcgc
ttcgccgccaagctgaggttcgagatcgagccgaccaccaatgcgccgatcgccgtgatg
gcgccgctgatcaacaacgtgccggccgcccgcgtgttcgacgagatgctcaagctcctg
atgagcggcagcgccctcgcctgcctgctgcagctgcgcaaggccggcctgcaccatggc
ctgctgccgctgctggacgtggtgctcgagcagccgctgggcttcaagttcgtgacgctg
gcgctggaagcgacggacaagcgcatcgcctccggcaagaccgtgtcgccgggcttcctg
ttcgcctcgctgctgtggcaccaggtgctggaaaagtggaatgcctaccaggcttccggc
gaattcccgatccccgcgctgcacattgccgcggacgaagtgctggaatcgcagaccgag
aagctggcgctgcagcgcaagatcggttccgacatgcgcgacatctgggccatgcagccg
cgcttcgagcgccgcaacggcaagaacccgtacaagctgctggaacacgtgcgcttccgc
gccggctacgatttcctgctgctgcgctgcgcttccggcgagatcgagcaggagctgggc
gactggtggagcgcgttctacgaagccgacgaaacggtccgcgccgagatggtgacggcc
atttccagcggcggcgcggcgagcaagcgcaagcgcgcaccacgccgcggcacgcgccat
gaggaaggcgccgaagccgtggaagcctcggacgacgacggcttcgacggcgacgagctg
catgccgaaggcgaacacgaaggcgacacggcggcggccccgaagcggcgccgccgcggc
ccgcgccgcaagcgcggcgaaggcggcgcgccggacacggccccgaccacgcccaccatc
gactga
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