Pseudoduganella albidiflava: EYF70_01430
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Entry
EYF70_01430 CDS
T05903
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
mali
Pseudoduganella albidiflava
Pathway
mali02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mali00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EYF70_01430
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mali03021
]
EYF70_01430
Transcription machinery [BR:
mali03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EYF70_01430
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
Sigma70_r4
HTH_23
PhyR_sigma-like
HTH_Tnp_ISL3
HTH_7
GerE
HTH_24
HTH_28
HTH_11
HTH_38
HTH_Tnp_4
HTH_3
HTH_IclR
wHTH-HSP90_Na-assoc
HVO_A0261_N
HTH_27
HTH_31
Xre-like-HTH
HTH_40
Terminase_5
HTH_29
MarR_2
HTH_10
HTH_20
Phage_NinH
Motif
Other DBs
NCBI-ProteinID:
QBH99650
UniProt:
A0A411WS90
LinkDB
All DBs
Position
complement(331508..332035)
Genome browser
AA seq
175 aa
AA seq
DB search
MPAASSPHAPAGLPAQVQQLYAGHHQWLLGWLSRKLGCTFHAADLAHDTFVRLLSSERAV
AIDEPRAFLTTVAKRLLLNHYRREQIERAYLDTLAALPEALAPSPEERAMVLEALCAIDR
LLDGLPAPVRQAFLYAQLEGMPQADIAQRLDVSQTTVKRYLVRAMTQCYFAGAAN
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
atgccggccgcttcttccccccacgcgcctgccggactgcccgcacaggtgcagcagctg
tatgccgggcaccaccagtggctgctcggctggctgtcgcgcaagctcggctgcaccttt
catgccgccgacctggcgcacgacacgttcgtgcgcctgctgtccagcgagcgagcggtg
gcgatcgacgagccgcgcgccttcctcaccacggtggcgaagcggctgctgctgaaccac
taccggcgcgaacagatcgaacgggcttacctggacaccctggccgccctgcccgaagcg
ctcgccccctcgccggaagagcgcgcgatggtgctggaagcgctgtgcgcgatcgaccgg
ttgctggacggcctgccggcaccggtccggcaggcgttcctgtatgcgcagctggagggc
atgccccaggccgatatcgcccagcgcctggacgtgtcgcagacaacggtcaagcgctac
ctggtgcgcgcgatgacgcagtgctacttcgccggcgcggccaactga
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