KEGG   Pseudoduganella albidiflava: EYF70_01970
Entry
EYF70_01970       CDS       T05903                                 
Name
(GenBank) type IIA DNA topoisomerase subunit B
  KO
K02622  topoisomerase IV subunit B [EC:5.6.2.2]
Organism
mali  Pseudoduganella albidiflava
Brite
KEGG Orthology (KO) [BR:mali00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mali03032]
    EYF70_01970
   03036 Chromosome and associated proteins [BR:mali03036]
    EYF70_01970
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:mali02048]
    EYF70_01970
Enzymes [BR:mali01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     EYF70_01970
DNA replication proteins [BR:mali03032]
 Prokaryotic type
  DNA Topoisomerases
   EYF70_01970
Chromosome and associated proteins [BR:mali03036]
 Prokaryotic type
  Chromosome partitioning proteins
   Other chromosome partitioning proteins
    EYF70_01970
Prokaryotic defense system [BR:mali02048]
 Toxin-antitoxin system (TA system)
  Type II TA system
   Type II TA system related factors
    EYF70_01970
SSDB
Motif
Pfam: DNA_gyraseB DNA_gyraseB_C HATPase_c Toprim HATPase_c_3
Other DBs
NCBI-ProteinID: QBH99740
LinkDB
Position
complement(458383..460380)
AA seq 665 aa
MATKKPVSDYSESSIRVLKGLEPVKQRPGMYTRTENPLHIIQEVIDNASDEALGGHCRNI
VVTQNGDGSITVEDDGRGIPVGLHPEENVPTVEIVFTRLHAGGKFDKGSGGAYAFSGGLH
GVGVSVTNALSKRLEINVWRKDDKGNGYHTIAFENGDLVQPLTSGPAPKDGKKSGTRVTA
WPDAKYFDSPLISQVELQRLLRSKAVLLPGVTVTLKNAKTGDVQTWQYNDGLRGYLTEAL
AQTGNGETWVPLFEGEQFAGPDAEGFAEGEGASWVVAWTEEGAIMRESYVNLIPTPNGGT
HESGLREGLFGAMKNFVELHSLLPKGVKLLPEDVFARASFVLSAKVLDPQFQGQIKERLN
SRDAVRLVSTFSKPALELWLNQHIDWGKKLADLVIKQAQSRLRSAQKVEKKKSSGVAVLP
GKLTDCESTDVSRTELFLVEGDSAGGSAKMGRDKEFQAILPLRGKVLNSWETDRDRLFAN
NEIHDIAVAIGVDPHSFSDTPDLSNLRYGKICILSDADVDGSHIQVLLLTLFFRHFPALI
QNGNICVARPPLYRVDAPARGKKPIQKLYALDDGELTAIEDKLRKDGLKDGSWSISRFKG
LGEMNAEQLWETTMNPDTRRLLPVALGDFAHTEAAARFNMLMGKGEAAARRAWIEEHGNE
VEADI
NT seq 1998 nt   +upstreamnt  +downstreamnt
atggccaccaaaaaaccagtttccgactacagcgaatcatcgatccgcgtcctgaagggc
ctcgaacccgtcaagcagcgtcccggcatgtatacccgcacggaaaatccgctgcacatc
atccaggaggtgatcgacaacgcatccgatgaggcgctgggcggccattgccggaacatc
gtcgtcacgcagaacggcgatggcagcatcaccgtcgaggacgacggccgcggcatcccg
gtcggcctgcacccggaagaaaacgtgcccaccgtggaaatcgtgtttacccggctgcac
gccggcggcaaattcgacaagggctcgggcggcgcgtacgcgttttccggcggcctgcac
ggtgtcggcgtatccgtcaccaacgcactgtcgaagcggctggaaatcaatgtctggcgc
aaggacgacaagggcaacggctaccacaccatcgccttcgagaacggcgacctggtgcag
ccgctgacgtccggcccggcgcccaaggatggcaagaagtccggcacccgcgtcaccgcc
tggccggacgcgaagtatttcgattcgccgctgatttcccaggtcgagctgcagcgcctg
ctgcgctcgaaggcggtgctgctgccgggcgtgaccgtcacgctgaagaatgccaagacg
ggcgacgtgcagacgtggcaatacaacgacggcttgcgcggctacctgacggaagcgctg
gcccagaccggcaacggcgaaacctgggtgcccctgttcgagggcgagcagttcgccggc
ccggacgcggaaggcttcgcggaaggcgaaggcgcctcatgggtggtggcatggacggaa
gaaggcgccatcatgcgcgaatcctacgtgaacctgattcccacgccgaatggcggcacg
cacgaatccggcttgcgcgaaggcttgttcggcgcgatgaagaacttcgtcgaactgcac
tcattgttgccgaaaggcgtgaaactgctgccggaagacgtgttcgcgcgtgcctcgttc
gtgctgtcggcgaaggtgctcgacccgcaattccagggccagatcaaggaacgcctgaac
tcgcgcgacgcggtgcgcctggtctccacgttcagcaagccggcgctggagctgtggctg
aaccagcacatcgactggggcaagaagctggccgacctcgtcatcaagcaggcccagtcg
cgcctgcgctcggcgcagaaggtggaaaagaagaaatcgtccggcgtggccgtgttgccg
ggcaagctgaccgattgcgaatcgaccgacgtgtcgcgcaccgaactgttcctggtcgag
ggcgactcggcgggcggctcggcgaagatgggccgcgacaaggaattccaggccatcctg
ccgctgcgcggcaaggtgctgaactcgtgggagacggaccgcgaccgcctgttcgccaac
aacgagatccacgacatcgccgtggcgatcggcgtcgacccgcacagcttcagcgacacg
ccggacctgtcgaacctgcgctacgggaaaatctgcatcctgtcggacgccgacgtcgac
ggttcgcacatccaggtgctgctgctcacgctgttcttccgccacttcccggcgctgatc
cagaacggcaatatctgcgtggcgcgcccgccgctgtaccgcgtggatgcgccggcgcgc
ggcaagaagccgatccagaagctgtatgcgctcgatgacggcgaactgaccgcgatcgag
gacaagctgcgcaaggatggcctgaaggatggcagctggagcatttcccgcttcaagggc
ctgggcgagatgaatgccgagcagctgtgggaaaccaccatgaatcccgatacgcggcgc
ctgctgccggtggcgctgggcgatttcgcccacaccgaggcggcggcccgcttcaacatg
ctgatgggcaagggcgaagccgccgcccgccgcgcatggatcgaggaacacggcaacgaa
gtcgaagcagatatctga

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