Pseudoduganella albidiflava: EYF70_02300
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Entry
EYF70_02300 CDS
T05903
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
mali
Pseudoduganella albidiflava
Brite
KEGG Orthology (KO) [BR:
mali00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mali03400
]
EYF70_02300
Enzymes [BR:
mali01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
EYF70_02300
DNA repair and recombination proteins [BR:
mali03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
EYF70_02300
Prokaryotic type
EYF70_02300
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QBH99800
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Position
complement(536971..538407)
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AA seq
478 aa
AA seq
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MPQSNSTAPGALVWFRRDLRSFDHAALHHALLAGTPVYCAFIFDSPILEGLPRDDRRVAF
IHASLGELAAELEALGGHLLVRHGDARAEIPALAAELGVATVYANEDYDPAAIARDEAVA
ETLAVAGCALKLFKDHVIFARSEVLSQAGKPLGVFTPYKNAWKKRLEAQPDALAPWPVDP
HAAALAPGRSQLPSLQEIGFDGADLAAAGITPGMRGGAALFDAFLPSLGDYGTGRDYPAR
DGTSRLSLHLRFGTVSIRHLVRTVLQLSARGQAGEGGATWLSELVWRDFYQMILYHHPHV
VHASFKPVYDKVDWETGPAAEELFAAWCEGRTGYPLVDAAMAQLNTTGFMHNRLRMVTAS
FLCKDLGIDWRRGEAYFALKLNDYELASNNGGWQWAASSGCDAQPFFRIFNPVTQSERFD
QEGDFIRQFVPRLARLSAKAIHAPWLHGGVDGYPAPIVDHAEARQRTLERYEVVKARG
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgccccaaagcaattccaccgcgcccggcgcccttgtgtggttccgccgcgacctgcgc
agcttcgatcacgccgccctgcaccacgccctgctggcgggtacacccgtctactgtgcc
ttcattttcgacagcccgatcctggagggcttgccacgcgatgaccgccgcgtggcgttc
atccatgcgtcgctgggcgaactcgcggccgagctggaagcgcttggcgggcacctgctc
gtgcgccatggcgatgcgcgcgccgagatcccggcactggccgccgagctcggcgtggcc
accgtgtacgccaacgaggattacgatccggccgccatcgcccgcgacgaagccgtggcc
gaaacgctggcggtggctggatgcgccttgaaactattcaaggatcacgtgatcttcgcc
aggagcgaagtgctgtcgcaggccggcaagccgctcggcgtgtttacgccctacaagaac
gcctggaaaaaacgcctggaagcgcaacccgacgcgctggccccctggccggtcgatccc
cacgcggcggcgctggcgcccggccgctcgcagttgccatcgctgcaagagatcggcttc
gatggcgccgacctggccgcggccggcatcacccccggcatgaggggcggtgccgcgctg
ttcgacgccttcctgccgagcctcggggactacggcaccgggcgcgactatccggcgcgc
gatggcacgtcgcgcctgtcgctgcacctgcgcttcggcacggtgtcgatccgccacctg
gtgcgcacggtgctgcagctgtcggcgcgcggacaggccggcgaaggcggcgccacgtgg
ctgtccgaactggtgtggcgcgacttctaccagatgatcctgtaccaccacccgcatgtg
gtgcacgcctcgttcaagccggtgtacgacaaggtcgactgggaaaccggcccggcagcc
gaggaactgttcgccgcctggtgcgaaggccgcaccggctacccgctggtcgacgcggcg
atggcacagctcaacaccaccggcttcatgcacaaccggctgcggatggtgacggccagc
ttcctgtgcaaggacctgggcatcgactggcggcgcggcgaagcctatttcgcgctgaaa
ctgaacgactacgaactggcttccaacaatggcggctggcagtgggcagcctcgagcggc
tgcgatgcccagccgttcttccgcatcttcaatcccgtcacgcagtcggagcgcttcgac
caggaaggcgacttcatccgccagttcgtgccgcggctcgccaggctgtccgccaaggcg
atccatgcgccgtggctgcatggcggcgtggatggctatccggcaccgatcgtcgaccac
gccgaggcgcggcagcgcaccttggaacgctacgaggtggtgaaggcgcgcggctga
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