Pseudoduganella albidiflava: EYF70_04405
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Entry
EYF70_04405 CDS
T05903
Name
(GenBank) RNA polymerase sigma factor FliA
KO
K02405
RNA polymerase sigma factor FliA
Organism
mali
Pseudoduganella albidiflava
Pathway
mali02020
Two-component system
mali02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
mali00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EYF70_04405
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
EYF70_04405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mali03021
]
EYF70_04405
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
mali02035
]
EYF70_04405
Transcription machinery [BR:
mali03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EYF70_04405
Bacterial motility proteins [BR:
mali02035
]
Flagellar system
Flagellar assembly proteins
Stator
EYF70_04405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r3
Sigma70_r4_2
HTH_23
MarR
PhyR_sigma-like
UPF0122
CLZ
Motif
Other DBs
NCBI-ProteinID:
QBI00173
UniProt:
A0A411WTS8
LinkDB
All DBs
Position
1043696..1044427
Genome browser
AA seq
243 aa
AA seq
DB search
MYTVKGKVNKDSLLTEHMPLVKRLAHHMKAKLPPSVEVDDLVQAGMIGLLDAINRYEETH
GAQFETYAVMRIRGAMLDELRSSDWMPRTLRQDMRKIENAMSVLQQKLGRPPAESEVAAS
LKLSLEAYQEMLGEGGGHQLLYYEDFKNEDGSDSFLDRYAQDDEADPLRSLMDTGFRQAV
IDAIDALPPREKLLMGLYYEEELNLKEIGAVMGVSESRVSQLHTQAVSRLRATLREQAWT
GPA
NT seq
732 nt
NT seq
+upstream
nt +downstream
nt
atgtacacggtcaaagggaaggtgaacaaggattcgctgctgacggagcacatgcccctg
gtgaagcgccttgcccaccatatgaaggcaaaattgccgcccagcgtggaagtggatgac
ctggtacaggcgggcatgatcggcctgctcgacgcgatcaaccgctacgaagaaacgcac
ggtgcccagtttgaaacctatgcggtgatgcgcatccgcggcgccatgctcgatgaattg
cgcagcagcgactggatgccgcgcaccttgcggcaagacatgcgcaagatcgagaacgcc
atgtcggtgctgcagcaaaagctgggccgcccgccggccgaatccgaagtggccgcgtcg
ctgaagctgtcgctcgaggcctaccaggaaatgctgggcgaaggcggcggccaccagctg
ctgtattacgaagacttcaagaacgaggacggcagcgacagcttcctcgaccgctatgcc
caggacgacgaagccgatccgctgcgttcgctgatggacaccggtttccgccaggccgtg
atcgatgcgatcgacgccttgccgccgcgtgaaaaactgctgatgggcctgtactacgaa
gaagagttgaacctgaaggaaatcggcgccgtgatgggcgtctccgaatcacgcgtgtcg
cagctgcatacccaggcggtgtcgcggctgcgcgccacgttgcgggagcaggcatggact
ggtccagcgtag
DBGET
integrated database retrieval system
