Pseudoduganella albidiflava: EYF70_05175
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Entry
EYF70_05175 CDS
T05903
Name
(GenBank) PAS domain S-box protein
Organism
mali
Pseudoduganella albidiflava
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_4
Response_reg
PAS_3
HATPase_c
PAS_9
PAS
PAS_8
HisKA
SPOB_a
Motif
Other DBs
NCBI-ProteinID:
QBI04843
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All DBs
Position
1216972..1220250
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AA seq
1092 aa
AA seq
DB search
MGDLVRAFDWAGTALGPLAGWTPALRTTVDILLNSPIAMVLMWGPRHVMVYNDGYIEIAG
ARHPAALGGTVPETWPEIWDWNRAILEAGLRGETQQHSGKLLTLMRNGVPEDVWFDLFYT
PVHDTCGTVGGVLCTVVDVTRRVQAERAREQDRAQLDQQNRRLREETGLLRELFEQAPGF
MAVLRGPDHVFELANRPYQRLVGGRDIIGKPVGEALPEVRGQGIVDLLDRVYASGEPYVG
RQLKIDLLGDDGLLEPRYLDFVYQPLRAPGGAVTGVFVEGVDVTEHILTEERLRMAQQAG
GIGSFEWFPASGKLVVSPEYRRVWGLGPDVEVTEQLLVSLVDPRDRDRVGPHRLDRDPNP
LAYTEYRIRRPDTGEVRWLARQGEVVEGATPAQRRYMGVAFDITGRKRIEQQLRTSQDRL
AAIFGQASVGLSELSLEGRYTRVNGALCHMLGRSEEGLLGLHMEDLIHPDDLAENRAQVA
RLKETGVPFTLEKRYARPDGEWVWIASSMSRLDDEAGQPVALIAVKTDITERRRIEVALR
DLNDTLEQRVSREIAERDKAEEALRQAQKMEAVGQLTGGVAHDFNNVLQIISGNLHLLAQ
QVGGDEAVRRRLDMAIAAVERGAKLSSQLLAFARRQPLQPVVTDLGRLVSNMDELLRRAL
GEAVDLVTVVGSGLWNTLVDPGQIENVVLNLAINARDAMQGAGRLTIELGNAVLDEHYVS
QLADVPAGQYVMLSVTDTGCGMTPEVLQRAFEPFFTTKPEGEGTGLGLSMAYGFVKQSRG
HIRIYSEPGQGTSVKIYLPRTMLAEAADTGQDGRHDGSIIGGTETILAVEDDEGVRTVVL
DMLSALGYRVLAAENGEQALRIIESGEHVDLLFTDVVMPGPLRSPELARIAQQVLPNLAV
LFTSGYPQDAIVHGGRLDAGLELLSKPYRREDLARKLRHVLNNRMHQIQARERQQSASHH
LLEPQPQHAQAHLHHSSLRVLVVEDNQDSLQMVCELVGMLGHTVSGVGDGESAWQLMQSQ
EFDVLFTDVSLPGMSGIDLARKVAKEKPVRIIFSTGYGKEALDHLEFAAACLRKPYDLMD
LQAALDNVPRPG
NT seq
3279 nt
NT seq
+upstream
nt +downstream
nt
atgggcgacctggtgcgcgcgttcgactgggccggcaccgcgctgggcccgctcgccggg
tggaccccggccttgcgcacgaccgtcgacatcctgctcaattcgccgatcgcgatggtg
ctgatgtggggcccgcggcacgtgatggtctacaacgacggctacatcgagatcgccggc
gcgcgccaccccgcggcgctgggcggcacggtgccggaaacgtggccggagatctgggac
tggaaccgggcgatcctggaagcggggctgcgcggcgaaacccagcaacacagcggcaag
ctgctgacgctgatgcgcaacggcgtgccggaagacgtctggttcgacctgttctacacg
ccggtccacgatacctgcggtacggtgggcggcgtgctgtgcacggtggtcgacgtgacg
cggcgggtgcaggcggaacgggcgcgcgagcaggaccgcgcgcagctggaccagcagaac
cgccgcctgcgcgaggaaaccggcctgctgcgcgagctgttcgagcaggcgcccggcttc
atggccgtgctgcgcgggccggatcatgtgttcgaactggcgaacaggccctaccagcgc
ctggtgggcgggcgcgacatcatcggcaagccggtcggcgaggcactgccggaagtgcgc
ggccagggcatcgtcgacctgctcgaccgggtctatgccagcggcgagccctacgtgggg
cgtcagctgaagatcgacctgctcggcgacgacggcctgctcgagccgcgctacctcgat
ttcgtctaccagccgctgcgcgcgcccggcggcgcggtaacgggcgtgttcgtcgaaggc
gtcgacgtcaccgaacacatcctcaccgaggagcggctgcgcatggcgcagcaggccggc
ggcatcggcagtttcgaatggttccccgccagcggcaagctggtggtctcgcccgaatac
cggcgcgtgtggggcctggggccggatgtcgaggtgaccgagcagctgctggtctcgctg
gtcgatccgcgcgaccgcgaccgcgtggggccgcaccggctggaccgcgacccgaatccg
ctggcctacaccgaataccgcatccgccgcccggataccggcgaagtgcgctggctggcc
cggcagggggaagtggtcgaaggcgccacgccggcgcagcgccgctacatgggcgtggcc
ttcgacatcaccgggcgcaagcggatcgagcagcagctgcgcaccagccaggaccggctg
gcggcgatcttcgggcaagcctcggtcggcttgtccgaactgtcgctggaagggcgctac
acgcgcgtcaacggcgcgctgtgccacatgctgggccgcagcgaggaaggcttgctgggc
ctgcacatggaagacctgatccacccggacgacctggcggaaaaccgcgcccaggtggcc
cggctgaaggaaaccggggttccgttcacgctcgagaagcgctatgcgcggccggatggc
gaatgggtgtggatcgccagcagcatgagccggctggacgacgaggccggccagccggtg
gccctgatcgccgtgaagaccgacatcaccgagcgccgccgcatcgaggtggcgctgcgc
gacctgaacgatacgctggaacagcgcgtgagccgtgaaatcgccgaacgcgacaaggcc
gaggaagcgctgcgccaggcgcagaagatggaagcggtgggccagctgacgggcggcgtg
gcgcacgacttcaacaacgtgctgcagatcatttccggcaacctgcacctgctggcccag
caggtgggcggcgacgaggcggtgcgccggcggctggacatggcgatcgccgcggtggag
cggggcgccaagctgtcgtcgcagttgctggcgtttgcccgccggcagccgctgcagccc
gtcgtcaccgacctgggccgcctggtctcgaacatggacgagctgctgcgccgcgcgctg
ggcgaggcggtcgacctggtgacggtggtcggcagcggcctgtggaatacgctggtcgat
cccggccagatcgagaatgtggtgttgaacctggcgatcaatgcgcgcgatgcgatgcag
ggcgccgggcgcctgacgatcgaactgggcaacgcggtgctcgacgagcattacgtgagc
cagctggccgacgtgccggccggccagtacgtgatgctgtcggtgaccgataccggctgc
ggcatgacgcccgaggtgctgcagcgcgccttcgagccattcttcaccaccaagccggaa
ggcgagggcaccggtctggggctgtcgatggcgtacggcttcgtcaagcagagccgcggc
cacatccgcatctacagcgagcccgggcagggcaccagcgtgaagatctacctgccgcgc
acgatgctggccgaagccgccgataccggccaggatggccggcacgatggctcgatcatc
ggcggcacggaaaccatcctggcggtggaagacgacgaaggcgtgcgcaccgtggtgctg
gacatgctgtccgcgctcggctaccgtgtgctggcggccgagaacggcgaacaggcgctg
cgcatcatcgaatccggcgagcatgtcgacctgctgttcaccgacgtggtcatgcctggt
ccgctgcgcagcccggaactggcgcgcatcgcccagcaggtgctgccgaacctggcggtg
ctgttcacgtccgggtatccgcaggatgccatcgtgcacggcgggcggctggacgccggg
ctggaactgctgagcaagccttaccgccgcgaagacctggcgcgcaagctgcgccacgtg
ctgaacaaccgcatgcaccagatccaggcgcgcgagcggcagcagtcggccagccatcac
ctgctggaaccgcagccgcagcatgcgcaagcgcatctgcaccattcgtcgctgcgcgtg
ctggtggtggaggataaccaggattcgctgcagatggtgtgcgaactggtggggatgctg
gggcatacagtgtccggcgtgggcgatggcgagtcggcctggcagctgatgcagagccag
gaattcgacgtgctgttcaccgacgtgagcctgcccggcatgtccggcatcgacctggcg
cgcaaggtggcgaaggaaaagccggtgcgtatcatcttctcgaccggctatggcaaggaa
gcgctggaccacctggaattcgccgccgcgtgcctgcgcaaaccctacgacttgatggac
ctgcaggcggcgctggacaacgttccgcgccccggctga
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