Pseudoduganella albidiflava: EYF70_05825
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Entry
EYF70_05825 CDS
T05903
Name
(GenBank) DUF4214 domain-containing protein
KO
K20276
large repetitive protein
Organism
mali
Pseudoduganella albidiflava
Pathway
mali02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mali00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EYF70_05825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4214
Big_13
Big_12
Big_9
Expansin_C
HemolysinCabind
Cadherin_5
Big_5
GEVED
Cadherin_3
Motif
Other DBs
NCBI-ProteinID:
QBI00422
LinkDB
All DBs
Position
1358663..1364956
Genome browser
AA seq
2097 aa
AA seq
DB search
MPSTFDFTANVIADTDPNAGPGITTATQTVDGHTLRLVGDSGGWVVMSENDFLGGDLQRL
HGQALFKEFNDIATKLRLSLDGNKLFDLTSLNLVDIVANSGGQFRFTTAKGVVDSGPLDS
EWSVSFFSNSPILAGIAWVDITMVDPAHQFIPAIDDIVLSNITSPNVAPAFVGAGTTMSA
VQNGGAVNLAGLLHASDTDSGQTLTWSQSAGPAHGTLSISGATAASGSTDITPGGTLGYT
PAAGYAGTDSFTVQVSDGIATSSRTITVSVAPLPPGAPDLASASDTGASASDNVTAANSM
TFSGTSAPGDIASTVRVFIDVNDNGAYNAGEATGTATVSNGAWTVAGVDTSGLGTGSYNV
RAVVTSATGGLSSGAGSALAITVDRTPPAMTFSGVTLSADTGVPGDAVTNTAAQTITATL
TSALAATDTVRGSLDNGATWTTLTGMVSGTTLAWTGATLVASGGIRLQVLDEHGNAGTTT
SQAYALDVTPPAQTVALAALSADSGAGGDFVTNTAAQTLSGTLSGNTAAGDVVEVSLNNG
ASWTMASHAAGTSTWSLPAQILAASGILQVRVTDAAGNPGTAYTHAYLVDSAAPTATTPA
SSSLVAPTGSAWTVTVTYADTGGAGIDTATIGTGNIGVTGPQGGALAVTGFAVNGNQVTY
TVAAPGGGWGPEDAGAYTVAIHGGVADVAGNAVAANASAETVDVVFSTAPAVSQLALSAD
TGTSNSDFITHIASQTVTATLGIGLAAGDRLWGSLDNGQTWADITHTVSGTGVQWSGVTL
AGSNTLVVRATDSNGQPGTAASHAYTLDTAAPAQGFDDVALSADTGASGTDFVTATALQN
IGGVLNGAAGQGEFVEVSLDNGASWAPATTSGSTWSLHGITLPASGTLQVRVADVAGNHG
SPAVRAYLVDTLAPTAAMPATTDLAGPTGGTFEFTVTYADTGGAGLDTATLGTGNVAVAG
PHGNPVTVTAFSVDGNAVTYTAQAPGGSWDAGDAGAYTVAVNGASVRDMAGNTVAADPAA
GTITVGYRTPPAASVLRLGSDTGISDTDFITSVAAQTIHATLDKALAASDTAWGSLDNGQ
SWTNITAKVSGTAVAWDGVSLAGAGTVVVKVTDGVGQDGAAASHAYVLDTAAPARTVATV
ALSADTGASSTDFITQTAGQDLSGTLDGALADGEFVEVSLDDGATWAVASASGTGWTLQG
ATLAAMGVLQVRVSDTAGNHAAPWTQAYVVDTAAPVAAPPVRADLDASGASFTFTVAYAD
AGGAGLDPATFGTGNVAVTGAAGALAVSGYSVAGGTVTYTVDAPGGSWDTNELGDYTIGI
AANSVRDLAGNAVAANPAAHMFHVGTTLRATLAIADTALTAGETTTMTVTFTRAVQDLDV
ADFTVPNGSLAALATADGGLTWTATLTPDGDAWANANVVTLNLALVHGPDGIAGTGTAES
NAYAVRTGSEPGGEVPPPPPPPGAVDGVPVTVTQQEDPATGLVNNVVTVPTVTATRNEDP
GTPNAALADIPLTASRGGSGSALTVSLPVGAGLDVSGAASLLTGDDALRDLIHRIEQKTA
AGSGVREEMTAEGTAFLEGLLGDVLLQTATVTPTALDDGTARTILIGGSTVPGTPADAAA
RGIVIDARQLPDSVTLQLDDVHFAAVVGAATLRGGAGQNIVIGDSAGQDIFLGEEDDQLL
GGGGDDVLGSAGGNDLLSGGDGNDAAAGGTGNDSVAGGSGDDVLQGGRSDRGAWTFTLAA
NGTVTAIHQTRMFAATASETLAAAELDADAGALAFLATPAERLLDIALLYQGAFGRAADL
EGLNFHAVHAGSAIQVAQSFTVSEEWAGSVLNVAGDTDYVEALYRQVLGRAADAEGMAFW
TGAMAGTHGAAASRAEVLLGFTGSAEHRGQHAGSIVLGTADVAAEQGWIGGSGDDRLEAG
AGNDWLAGGDGSDTAVFAGALADYGMLVTGGGKAVLTSTAHGADTISGIEWGEFADGGLD
LSFAQDPHAVTAGLLYQAVLDRAADLPGIAWWSAHGGTASQMAAGFVDSAEFQASYGALD
DRAFVDALYANSALGDGMAGGAAAWVDYLREHTRAELVGAWIGHEAVVAAHLTTAGL
NT seq
6294 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcaccttcgacttcactgccaacgtcattgccgataccgatcccaatgccggg
cccgggataacgactgcaacccagaccgtcgacggccacacattgcggctggtcggggat
tccggtggctgggtggtgatgagcgagaacgatttcctgggcggcgatctgcagcgcctg
cacggccaggcgctgttcaaggaattcaacgatatcgcaaccaaactcaggctatcgctg
gacggtaacaagctgttcgatctcacgtcgctgaacctggtggatatcgtcgcgaattcg
ggcgggcaattccggttcacgacagccaagggcgtggtcgacagcggaccgctggacagc
gaatggtcggtgtcgtttttctccaattctccgatccttgccggaatcgcgtgggtcgac
atcaccatggtcgacccggcacatcagttcattcccgccatcgatgacatcgtcctcagc
aatattacctcgccgaacgtggcgccggccttcgtgggcgcgggcaccacgatgtcggcc
gtgcagaatggcggcgctgtcaacctggccgggctgctgcacgccagcgacacggacagt
ggccagacgctgacatggtcacagagcgccggcccggcccacggcaccctgtcgatcagc
ggtgccaccgccgcgtcgggcagtaccgacatcacccccggcggtacgcttggctacacc
cctgcggccggctacgcgggcaccgacagctttaccgtccaggtctcggacggtatcgcg
acgtcgagccgcaccatcaccgtcagcgtggcgccgctgccgcccggcgcgccggacctg
gcgtccgccagcgataccggcgccagtgccagcgacaacgtgaccgcggcgaactcgatg
acgttctccggtaccagcgcgccgggcgatatcgccagcacggtgcgcgtgttcatcgac
gtcaacgacaatggcgcctataacgcgggcgaagccactggtaccgccaccgtcagcaac
ggtgcgtggacggtggcgggcgtcgatacgagcggcctcgggaccggcagctacaacgtg
cgcgccgtggtgacgtcggccacgggcggcttgagcagcggcgccggcagtgcgctggcg
atcacggtggatcgcacgccgcccgccatgacgttcagtggcgtgacgctgtccgccgac
accggcgtgccgggcgacgcggtcacgaacacggcggcgcagacgattacggccacgctc
acctcggcactggcggccaccgacaccgtgcgcggctcactcgacaatggcgccacgtgg
acgacgctgacgggcatggtcagcggcaccacgctggcgtggaccggcgccacgctggtg
gccagcggcgggatccggctgcaggtgctcgacgagcatggcaacgccggcaccaccacg
tcgcaggcctatgcgctcgacgtgacgccaccggcgcagacggtggcgctggccgcgctg
tcggccgacagcggcgccggcggcgacttcgtcacgaatacggcggcgcagacgctgtcc
ggcactctgtcgggcaacacggccgccggcgacgtcgtcgaggtatcgctgaacaacggc
gccagctggacgatggccagccacgccgccggcaccagcacctggtcccttcccgcgcaa
atcctggccgccagcggcatcctgcaggtgcgcgtaaccgacgcggcgggcaatcccggc
acggcgtacacccatgcctacctggtcgacagcgcggcgccgacggcgacaacgccggcc
agcagcagcctcgtggcgcccaccggcagtgcttggaccgtcacggtcacgtatgccgac
acgggcggcgcgggcatcgataccgcgacgatcggcaccggcaacattggcgtcaccggt
ccgcagggcggcgcgctggcggtcacggggttcgccgtgaacggcaaccaggtgacctac
acggtggcggcgcccggcggaggctggggcccggaagatgccggcgcctacacggtcgcc
atccatggcggtgtcgccgatgtggcgggcaacgccgttgccgcgaacgcgtcggcggag
actgtcgacgttgtcttcagcaccgcgccggcggtcagccagctggcactgtcggccgat
acgggcaccagcaacagcgacttcatcacgcacatcgccagccagaccgtcaccgccacg
ctcggcattgggctggcggccggcgacaggctctggggatcactggacaacggccagacc
tgggccgatatcacgcacaccgtcagcggtaccggcgtgcagtggagcggcgtgacgctg
gcaggcagcaatacgctggtcgtccgggctaccgacagtaacggccagcccggcaccgcc
gccagccatgcctatacgctggacacggccgcgccggcgcaagggttcgacgatgtcgcg
ctttcggcggacacgggggccagcgggacggatttcgtcaccgccacggcgctgcagaat
atcggcggggtattgaacggcgcggcggggcagggcgagttcgtcgaagtctccctggac
aacggcgccagctgggcacccgccaccacgagcggcagcacctggtcgctgcatggcatt
acgctgccggccagcggcacgctgcaggtgcgcgtggcggacgtcgccggcaaccacggc
agcccggcggtgcgcgcctacctggtcgataccctggcgccgaccgccgccatgccggcc
accaccgacctggccgggccgacgggcggcacgttcgagtttaccgtcacgtatgccgac
accggcggtgcggggctggacacggcaacccttggcaccggtaacgtggccgtggcgggg
ccccacggcaatccggtgaccgtgaccgcgttcagcgtcgacggcaatgccgtcacgtac
acggcgcaggccccgggcggcagctgggatgcgggcgacgcgggcgcgtacacggttgcc
gtcaatggcgcgtcggtgcgcgacatggccggcaacacggtggcggccgatcccgccgcg
ggcacgatcaccgtgggataccgtaccccgcccgcggcaagcgtgctgcggctgggcagc
gacacgggtatcagcgataccgatttcatcaccagcgtggcggcgcagacgatccacgcc
acactggacaaggcattggcggccagcgatacggcatggggttcactggacaatggccag
tcatggacgaatatcacggccaaggtcagcggcacggccgtggcatgggatggcgtgtcg
ctggccggcgccgggaccgtggtggtgaaggtgaccgacggcgtcggtcaggacggtgcg
gccgccagccatgcctacgtactcgataccgccgcgccggcacgcacggtggccaccgtg
gcgctgtccgccgacacgggcgccagcagcaccgatttcatcacgcaaacggccgggcag
gacttgtcgggaacgctcgacggcgcgctggccgatggcgagttcgtcgaggtgtcgctc
gacgacggcgcgacctgggcggtggcgtccgccagcggaaccggctggaccctgcagggc
gccacgctggcggccatgggggtgctgcaggtgcgcgtcagcgacacggcgggcaaccac
gcggcgccttggacgcaggcgtacgtcgtcgatacggccgcgccggtggcggcgccgccc
gtgcgcgccgacctggatgcgagcggtgccagcttcacgtttaccgtcgcctatgccgat
gcgggcggtgcgggcctggatccggcgaccttcgggaccggcaatgtcgccgtcacggga
gcggccggagcgctcgccgtgtccggttacagcgtggccggcggcacggtcacgtacacg
gtcgatgcacccggcggcagctgggacaccaatgaactgggcgactatacgatcggcatc
gccgccaacagcgtgcgcgatctcgccgggaacgccgtcgctgccaacccggccgcgcac
atgttccacgtcggcacgacgctgcgggccacgctcgccattgccgataccgcgttgacg
gcgggcgagacgaccacgatgaccgtcacgttcacccgcgcggttcaggacctggacgtg
gccgatttcaccgtgccgaacggttcgctggcggcactggccacggcggatggcggattg
acctggaccgccacgctgacgcccgacggcgatgcctgggcgaatgcgaacgtggtgaca
ttgaacctggcgctggtgcacggccccgatggcattgccggtaccggcaccgccgagtcg
aacgcctatgcggtgcggacgggctccgaacccggcggcgaagtgccacctcctcctcct
ccgcccggcgcagtggacggagtccccgtcaccgtcacgcagcaggaagacccggcgacg
ggcctggtcaacaacgtcgttaccgtaccgaccgtgacggcgacacgcaatgaggatccg
ggcacgccgaacgccgcgctggccgacataccgctcaccgcgtcgcgcggcggcagcggc
tcggcgctgacggtcagcctgccggtcggcgcgggcctggacgtgagcggcgccgccagc
ctgctgaccggggacgatgcgctgcgcgacctgattcaccgcatcgagcaaaagactgcc
gccgggagcggcgtgcgcgaggagatgaccgcggaaggcacggcgttcctcgaaggactg
ctcggcgatgtgctgctgcagaccgccacggtgacgccgacggcgctggacgacggcacg
gcgcggacgatcctgatcggcggctcgaccgtgccgggcacgccggccgacgccgccgcg
cggggaatcgtcatcgatgcccgccagctgccggacagtgtcacgctgcagctcgacgac
gtgcacttcgccgccgtcgtcggcgccgccacgctgcgcggcggcgcgggccagaacatc
gtcatcggcgacagtgccggccaggacatcttcctcggcgaggaggacgaccagttgctg
ggcggtggcggcgacgacgtgctgggcagcgcgggcggcaacgacctgctgtccggcggc
gatggtaacgacgcggcggcgggcgggaccggcaacgacagtgttgccggtggcagcggc
gacgacgtgctgcagggcggccgcagcgaccggggcgcctggaccttcacgcttgcggcg
aacggcaccgtcacggcgatacaccagacgcggatgttcgcggccacggccagcgaaaca
ctggcagcggcggagctggacgccgatgccggcgcgctggcgttccttgccacgccagcc
gagcggctgctcgacattgcgctgctgtaccagggcgcgttcggccgcgccgcggatctc
gagggcctgaatttccatgctgtccacgcgggcagcgcgatccaggtggcgcagtcgttc
accgtatcggaagaatgggctggttcggtgctgaacgtcgccggtgacaccgactatgtc
gaagcgctgtaccgccaggtactggggcgggccgccgatgcggaaggcatggcgttctgg
accggggccatggcgggcacgcatggcgcggccgcttcgcgcgccgaggtgctgctgggc
ttcacgggtagcgcggagcaccgcgggcagcatgcagggagcatcgtcctcggtaccgcc
gacgtggcagccgaacaagggtggatcggcggcagcggtgacgaccggctcgaggcgggc
gcgggcaatgactggctggctggtggcgacggcagcgataccgcggtgttcgctggcgcg
ctcgccgattacggcatgctcgtcaccgggggcggcaaggcggtgctgacgtccacggcg
cacggcgccgacaccatctccggcatcgagtggggagagttcgcggatggcgggctggat
ctgtcgttcgcgcaggatccgcatgccgtgacggcgggactgctgtaccaggccgtgctg
gaccgggccgccgacctgcccggcatcgcctggtggtccgcgcacggcggaacggccagc
cagatggcagccgggttcgtggactcggccgagttccaggccagctacggcgcgctggac
gacagggcattcgtggatgcgctgtatgccaattcggcactgggcgatggaatggccggc
ggggccgcggcatgggtggattacttgcgcgaacacacacgcgccgagctggtcggcgcg
tggatcggccatgaagccgtggtcgctgcgcatttgacaacagccggcctgtaa
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