Pseudoduganella albidiflava: EYF70_09380
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Entry
EYF70_09380 CDS
T05903
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
mali
Pseudoduganella albidiflava
Pathway
mali03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mali00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EYF70_09380 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mali03400
]
EYF70_09380 (recC)
Enzymes [BR:
mali01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EYF70_09380 (recC)
DNA repair and recombination proteins [BR:
mali03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EYF70_09380 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QBI01033
LinkDB
All DBs
Position
2227753..2231196
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AA seq
1147 aa
AA seq
DB search
MATGIAPGLLILHGNQLEQLRAAVFQWLQANPLAPLESDVLLVQSNGVAEWLKIALAEQA
GVCAATRVALPARFLWEAYRAMLGRDRVPRTSAFDKGPLTWRLMRLLPALLREDAFEPLR
HFLKGGCQERRLQLAERLSDLFDQYQVYRADWLEDWAAGRDQMCCPRGLHYPLPEGQRWQ
AALWRAIIASVPEEERTLGRAGVHTEFLRAVASGAMPAAALPRRVVLFGVSALPYQTLQA
LAALARFTQVIVAVPNPCRFYWGDIIDGRDLLRAARRRQPQRNGIDLASVPIEALHAHSH
PLLASWGRQGRDYIRMLDEFDEASGDEAGHLRVDLFSDGDGDTLLQQLQGAVRDMLPLSE
HHFPVPDGEDRSIVFHIAHSVQREVEVLHDQLLARFAADPTLRPRDIVVMVPDIGVFTAA
IHAVFGQYKGGGKGGNTGGGKRGDARHIPFEIGDVNDRSVNPLLVALEWLLRLPQQRCRQ
SEVRDLLDVPALAARFGLADDDLPILGRWIEGAGVRWGLDRAHRAGLGLEPTGEQNAWIF
GIRRMLLGYASGTGGAFGDIEPYGEVGGLDAALAGSLAQLVEALLDWRNRLARPRTPAEW
GEQARALLVTFFDARDEADKLTMNELGATLNAWLETCDGAGFDEPVPLSVLREAWLGALD
EPSLEHQFVSGGVTFCTLMPMRAVPFRMVCLLGMNDGDFPRRASRADFDLLALPGMARPG
DRSRRDDDRYLMLEAVLAARDVLYVSWCGRNARDNSEQPPSVLVAQLLDYLKAGWHLDLH
ERTTEHALQPFSRRYFERGGLLTYAAEWRSAHAPGEAPALPPHAEPQDGQAPALPPYELD
ERFRLKLAGLVAFLRQPVKYFFAQRFGVRFADSALVGEDEEPFVLDALDRYFLEDEMLED
DGAVDEEDVRASLVERAARLQREGVLPIGVIGDRVRDNLIEALLPVRRAWLQLRGAFPEA
APKLPVGLELDGVVLEDWIDGLRADGNAKVWLAQMSSKALDKSGQPRGDKLAAAWLRQLA
AAAQGVPVTGLLVARDAVLSMPPLDGEAARAALAGLVALWRRGMDGPLPVASKTALALLS
GGDPRETYEHGFDRRGEKDDMCLYRLWPEYGDLQAEPGFAATARALYGPLVDWLATVEVQ
PIEGGQP
NT seq
3444 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaggcatcgcacccggcttactgattctgcacggcaaccagctcgaacagctg
cgtgccgccgtgttccaatggctgcaggccaaccccctggcaccgctggaatcggacgtg
ctgctggtgcagtcgaacggcgtggccgaatggctcaagatcgccctggcggaacaggcg
ggcgtgtgcgccgccacccgcgtggcgctgccggcccggttcctgtgggaagcctaccgc
gccatgctgggccgcgaccgcgtgccgcgcacgtccgccttcgacaagggcccgctcacc
tggcggctgatgcgcctgctgccggcgctgttgcgcgaggatgccttcgagccgctgcgc
catttcctcaaggggggctgccaggaacgccggctgcagctggccgagcggctgtccgac
ctgttcgaccagtaccaggtgtaccgcgccgactggctggaagactgggcggccgggcgc
gaccagatgtgctgcccgcgcggcctgcattacccgctgccggaaggccagcgctggcag
gccgcgctgtggcgcgccatcatcgccagcgtgccggaggaagagcgcacgctgggccgc
gccggcgtgcacacggaattcctccgcgccgtggcgtcgggcgctatgccggcggccgcg
ctgccgcgccgcgtcgtgctgttcggcgtttccgcgctgccgtaccagaccctgcaggcg
ctggcggcgctggcccggttcacccaggtgatcgtggccgtgcctaacccgtgccgcttc
tactggggcgacatcatcgatggccgcgacctgctgcgcgccgcgcggcgccgccagccg
cagcgcaacggcatcgacctggccagcgtgccgatcgaggcgctgcacgcccacagccac
ccgctgctggcgagctggggccggcaggggcgcgactatatccgcatgctggatgaattc
gacgaagcttccggcgacgaggccgggcacctgcgcgtggacctgttcagcgatggcgac
ggcgacacgctgctgcagcagttgcagggcgcggtgcgcgacatgctgccgctgtccgaa
caccatttccccgtgccggacggggaggaccgctcgatcgtgttccacatcgcccacagc
gtgcagcgcgaggtggaagtgctgcacgaccagttgctggcccgtttcgccgccgatccc
acgctgcgcccgcgcgatatcgtcgtcatggtcccggacatcggcgtgttcacggcggcc
atccacgccgtcttcggccagtacaaggggggtggcaagggcggcaatacgggtggtggc
aagcgcggagatgcgcgccacatcccgttcgagatcggcgacgtcaacgaccgcagcgta
aacccgctgctggtggcgctggaatggctgctgcgcctgccgcagcagcgctgccggcaa
agcgaggtgcgcgacctgctggacgtgccggcgctggcggcccgcttcggcctggccgac
gacgacctgccgatcctcggccgctggatcgaaggggcgggcgtgcgctggggcctggac
cgcgcccaccgcgccggcctgggcctggagcccaccggcgaacagaacgcatggatcttc
ggcatccgccgcatgctgctcggctatgccagcggcacgggcggcgccttcggcgacatc
gaaccatacggtgaggtgggcggcctggatgccgcgctggccggctcgctggcccagctg
gtcgaagccctgctggactggcgcaaccggctggcccggccccgcacgccggccgagtgg
ggcgaacaggcgcgcgcgctgctggtcaccttcttcgatgcccgcgacgaagccgacaag
ctgaccatgaacgagttgggcgcgacgctcaacgcgtggctggagacgtgcgacggcgcc
ggcttcgacgagccggtgccgctgtcggtgctgcgcgaagcgtggctgggcgcgttggac
gaaccgtcgctggaacaccagttcgtctccggcggggtgacgttctgcacgctgatgccg
atgcgcgccgtgccgttccggatggtctgcctgctgggcatgaacgatggcgatttcccg
cgccgcgccagccgcgccgacttcgacctgctggcgctgcccggcatggcgcgccccggc
gaccgctcgcgccgcgacgacgaccgctacctgatgctggaagcggtgctggccgcgcgc
gacgtgctgtacgtgagctggtgcggccgcaacgcccgcgacaacagcgagcagccgccg
tcggtactggtggcgcaactgctcgactacctgaaggccggctggcatctcgacctgcac
gaacgcaccaccgagcacgcgctgcagccattctcgcgccgctacttcgagcggggcggc
ctgctcacctacgcggccgaatggcgctcggcccacgcgccgggcgaggcgccggcactg
ccgccgcatgccgaaccacaggatggccaagcccccgcgctgccgccgtatgaactcgac
gagcgcttccgcctgaagctggccggcctggtggccttcctgcgccagcccgtgaaatac
ttcttcgcccagcgcttcggcgtgcggttcgccgactcggcgctggtcggcgaagacgag
gaaccgttcgtgctcgatgcgctggaccgctacttcctggaagacgagatgctggaggac
gacggcgccgtggacgaggaggacgtgcgcgccagcctggtggaacgggcggcccggctg
cagcgcgaaggcgtgctgccgatcggcgtgatcggcgaccgcgtgcgcgacaacctgatc
gaagcgctgctgccggtgcgccgcgcctggctgcagttgcgcggcgcgttcccggaggcg
gcgcccaagctgccggtcggcctggaactggacggcgtggtgctggaagactggatcgac
ggcctgcgcgccgacggcaacgccaaggtatggctggcgcagatgtcgtccaaggcgctg
gacaagtccggccagccgcggggcgacaagctggcggccgcctggctgcgccagctggcc
gccgcggcgcagggcgtgcccgtgacgggcctgctggtggcgcgcgatgcggtgctgtcg
atgccgccgctcgacggcgaagcggcgcgcgccgcgctggccggcctggtcgccctgtgg
cggcgcggcatggacgggccgctgccggtggccagcaagacagcgctggcgctgctgtcc
ggcggcgacccgcgcgagacctacgagcatggcttcgaccgccgcggcgagaaggacgac
atgtgcctgtaccggctgtggccggagtacggcgacctgcaggccgaaccgggattcgcc
gcgaccgcgcgcgccctgtatggaccgctggtcgactggctggccaccgtcgaggtgcag
ccgatcgagggaggccagccatga
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