KEGG   Pseudoduganella albidiflava: EYF70_10930
Entry
EYF70_10930       CDS       T05903                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
mali  Pseudoduganella albidiflava
Pathway
mali03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:mali00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    EYF70_10930 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:mali02044]
    EYF70_10930 (tssM)
Secretion system [BR:mali02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   EYF70_10930 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical Phage_holin_3_6
Other DBs
NCBI-ProteinID: QBI01298
LinkDB
Position
complement(2602348..2606019)
AA seq 1223 aa
MKSLLSLLLHRRVTTGLGLAAFALLIWHVGPLVAIAGYRPLEPARIRLALICLVVLVYVG
KALWKLWQARRANASLMNGLLQQAPAAASPGDTMAAEELATLRKRFEGAVDVLRKARLTG
KPGAPGRWLASLGRQWVYELPWYILIGAPGSGKTTALVHSGLQFPLSGQFGREAIRGVGG
TRNCDWWFTDEAVLLDTAGRYTTQESDQKTDSAAWTGFLQLLKKYRVRRPINGALLTLSV
PDLLGQSPDERAAHLATLRKRLHELHEELDIRFPLYLLVTKLDLLPGFMEFFGELGKEDR
AQVWGMTFPIRDAAGKDATKGAARDAGKPDGGRDGMADGGNAAAPDFGNEFAALEARLNA
RLVDRMQAERDPQKRAQLYLFPQQFAALKGTLGEFVDGIVSDSRFAERPLLRGVYFTSGT
QEGSPIDRMLGGVGRALQLDRKMLPPQSPTGKSFFITRLLKDVVFQEAGLAGTNLRRERR
RALVQLGALAVAALLAAGMIVAWAVSYAGNRAYVAGVQERLDAIAQQVRALEANRSADVV
ELLPVLRTVRDLANVPGQAPGEAPFAMGAGLYQGDKLASAAQTAYRNLLRDVFLARLEAR
VRQQLQGAGGNPELLYEALKAYIMLHEPRHFQGAALKAFITADWESTLPRSVTLEQRREL
EAHLDALLAGERPTAPQPADQQLIASAREAVARTPLAVRIYNRIKRGGAGADLPEFTVAG
AAGPAAPLVFARASGQPLTSGVPGLYSVNGYRNAFLKEAARVTGQLADEEGWVLGLAEKD
RRFTDPAQRAGQLDEVRRLYLEDYARIWRAFVDDIKLVRAGSLQGSIQTARVLSMPDSPL
PALLRAVVREVTLVQGDAADKSIADKAGDTVESTRKELMKLFGSEAVKPAAARETQPERI
VDDRFDDLRRLVASAGPGQPAPIDATTSLINELYTLLTATEAALKGANTPPPSDVPNKVK
AQGGLMPEPVRSILLTLASGSASQALGMTRSNLNQAMGATLGEFCNNAVTGRYPFTKGSP
RDVTQDDFSRLFAPGGMIDEFFQKNLAQYVNTNTRPWSFRSVGDATMGGSSGALLQFQRA
QVIRDVFFRGGAAAGMRLELKPVMMDASITQFTLDVDGQLVKYSHGPQVPAQVQWPGPRG
STQVRLQVTPPSAAGASGRTYEGAWALFRLFDQAQVDGTGQPEKFIATFNVDGRRTQFEV
LTSSVRNPFRLAELEQFRCPGVL
NT seq 3672 nt   +upstreamnt  +downstreamnt
atgaaaagcctgctatccctgctgctgcaccgccgcgtgaccaccgggctgggcctggcc
gccttcgcactgctgatctggcatgtcgggccgctggtcgccatcgccggctaccggccg
ctggaaccggcccgcatccggctggcgctgatctgcctcgtcgtgctggtctacgtgggc
aaggcgctgtggaaactgtggcaggcccggcgcgccaatgccagcctgatgaacgggttg
ctgcagcaggcaccggccgccgccagccccggcgacaccatggccgccgaggaactggcc
acgctgcgcaagcgtttcgagggcgcggtagacgtgctgcgcaaggcacgcctcaccggc
aagcccggcgcaccggggcgctggctggccagcctgggccggcaatgggtctacgaactg
ccctggtatatcctgatcggcgcgcccggctcgggcaagaccaccgccctggtgcattcg
ggcctgcaattccccctgagcgggcaattcggccgcgaagcgatccgcggcgtgggcggc
acgcgcaactgcgactggtggtttaccgacgaagccgtgctgctggacacggccggccgc
tacaccacgcaggaaagcgaccagaagacggacagcgcggcgtggaccggcttcctgcag
ttgctgaagaagtaccgcgtgcgacggccgatcaacggcgcgctgctgacgctgagcgtg
ccggacctgctgggccagtcgccggacgagcgggccgcccacctggccacgctgcgcaag
cgcctgcacgaactgcacgaggagctcgacatccgctttcccctgtacctgctggtgacc
aagctcgacctgctgcccggcttcatggaattcttcggcgagctgggcaaggaagaccgc
gcccaggtgtggggcatgaccttcccgatccgcgacgcggccgggaaagacgccaccaag
ggtgcggcgcgggatgcgggaaagcccgatggcgggcgcgatggcatggctgatggcggg
aatgcggcggcgcccgatttcggcaacgaattcgccgcgctggaggcacgcctcaacgcc
cgcctggtcgaccgcatgcaggccgaacgggacccgcagaaacgcgcgcagctctatctg
ttcccccagcagttcgcggcgctgaagggcacgctgggcgaattcgtcgacgggatcgtc
agcgattcgcgtttcgccgaacggccgctgctgcgcggcgtgtacttcaccagcggcacc
caggaaggcagcccgatcgaccgcatgctgggcggcgtggggcgcgccctgcaactggac
cgcaagatgctgccgccgcagtcgcccaccggcaagagcttcttcatcacgcgcctgcta
aaagacgtggtgttccaggaagcggggctggccggcaccaacctgcgccgcgaacggcgc
cgcgcactggtgcaactgggcgcgctcgcggtggccgccctgctggccgccggcatgatc
gtggcgtgggcggtcagctacgcgggcaaccgcgcctacgtggccggcgtgcaggagcgc
ctcgatgcgatcgcgcagcaggtgcgggcgctggaagccaaccgcagcgccgacgtggtg
gaactgctgccggtgctacgcacggtgcgcgacctggccaacgtgcccggccaggcgccg
ggcgaagccccgttcgcgatgggcgcgggcctgtaccagggcgacaagctggcgtccgcc
gcgcagacggcctaccgcaacctgttgcgcgacgtgttcctggcgcgcctggaagcgcgc
gtgcgccagcagctgcagggcgccggcggcaacccggaactgctgtacgaggcgctgaag
gcctacatcatgctgcacgaaccgcgccatttccagggagcggcgctgaaagccttcatc
acggccgactgggaaagcacgctgccgcgcagcgtgacgctggagcagcgccgcgagctg
gaagcgcacctggacgcgctgcttgccggcgaacggccgacggcgccgcaaccggcggac
cagcagctgatcgccagcgcgcgcgaggccgtggcccgcacgccgctggcggtgcgcatc
tacaaccgcatcaagcgcggcggcgccggtgccgacctgccggaattcacggtggcgggg
gccgccggcccggccgcgccgctggtattcgcacgtgccagcgggcagccactgaccagc
ggcgttcccggcctgtacagcgtgaatggctaccgcaacgcgttcctgaaggaggccgcg
cgcgtgaccggccagctggccgacgaggaaggctgggtgctcggcctggccgagaaggac
cgccgcttcaccgatcccgcgcagcgcgctggccagctcgacgaagtgcgccgcctgtac
ctggaagactatgcgcgcatctggcgcgccttcgtcgacgatatcaagctggtgcgcgcc
ggcagcctgcagggcagcatccagacggcgcgcgtgctgtcgatgccggactcgccgctg
ccggcgctgctgcgcgccgtcgtgcgcgaggtcacgctggtgcagggcgacgcggcggac
aagagcatcgccgacaaggccggcgacacggtcgagagcacccgcaaggaactgatgaaa
ctgttcggcagcgaagccgtcaagcccgccgccgcccgggagactcagcccgaacgcatc
gtcgacgaccgcttcgacgacctgcgccgattggtcgccagcgccggtccgggccagccg
gcgccgatcgatgccacgacttccctcatcaacgagctgtacacgctgctgacggccacc
gaagcggcgctgaagggcgccaacacgccgccgcccagcgatgtgccgaacaaggtcaag
gcccagggcgggctgatgccggaaccggtgcgctcgatcctgctcacgctggcctcgggc
agcgccagccaggccctgggcatgacgcgcagtaacctgaaccaggcgatgggcgccacg
ctgggcgagttctgcaacaacgcggtgacgggccgctacccgttcaccaagggcagcccg
cgcgacgtgacccaggacgacttcagccgcctgttcgcgccgggcggcatgatcgacgag
tttttccagaagaacctggcgcagtacgtgaacacgaacacgcggccgtggagtttccgt
tcggtgggcgatgccacgatgggcggctcgtccggcgcgctgctccagttccagcgcgcc
caggtgatccgcgacgtgttcttccggggtggcgcggccgccggcatgcggctggaactg
aagccggtgatgatggacgcgtcgatcacgcagttcacgctcgatgtcgatggccagctg
gtgaagtacagccatggcccgcaggtgccggcccaggtgcagtggcccggcccgcgcggc
agcacgcaggtgcggctgcaggtgacgccgcccagcgcggccggcgcctcgggccgcacc
tatgaaggggcctgggcgctgttccgcctgttcgaccaggcccaggtggatggcacgggc
cagcccgagaagttcatcgccaccttcaacgtggacgggcgccgcacccagttcgaggta
ctgaccagcagcgtgcgcaatccgttccgcctggccgaactggaacagttccgctgcccg
ggtgtgctgtga

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