Pseudoduganella albidiflava: EYF70_11875
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Entry
EYF70_11875 CDS
T05903
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
mali
Pseudoduganella albidiflava
Pathway
mali02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
mali00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EYF70_11875
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mali02000
]
EYF70_11875
Transporters [BR:
mali02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
EYF70_11875
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QBI01470
LinkDB
All DBs
Position
2850731..2852509
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AA seq
592 aa
AA seq
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MDSWRSSNDATSLARVFAVPLHNHPTKGTCMRPRTTHLLAALILAFGAAGAAVAQAGPAV
PTYPASDYIQQAPGRPGGVLVTSASYEAGSFDIHKLHAGNLLWQSRLVFDSLVYLDSAGA
AMPWLAKSWTVSPDGRVVTFRLREDVTFSDGTRFDAEAVRINFERIKKLGTQSRIAAAYL
SPYVEGVAVDTYTFEARLDAPYPAFLSFLAQTWLGFISPRQISGDPASIGERPVGTGPFV
VTEYAPGKRAVLARRADYAWAPDYLRHAGPAYLDGIVIEAVPDDAARTASLQQGRHQLTF
EAPLTDGQRLRADPGLVFYNRVRPGSPMRSLAFNTARFPFDDVRIRRAAAIAIDRERVTR
ELSAGEFIAKADYLGTNTPGYVDTYRHVLAYDPAGAAALLDQAGWTERDRDGIRSKGGRR
LSAELLTTGDERTPPASVLAIQSGLKAVGIELRLKPVAGADLPAAVRAGAYDALTGGWWS
AATPDVLFLLYHSSQTARQNTFGQDTGRIADPVLDDLLLRARRSRDANERDALYRQAQKL
LTELVPVVPLHESHHLVAYSRQLKGVLFDTTHNTPILTGAWLAPAEEVAKER
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggactcctggcgatcatcgaatgatgcgaccagcctcgcgcgcgtcttcgccgtcccg
ttgcacaaccatccaaccaaaggaacctgcatgcgtcctcgcaccacccatctcctggcc
gccttaatcctggctttcggggcagccggcgcggccgtcgcgcaggccggcccggcagtc
ccgacctacccggccagcgactatatccagcaagcccccggccgccccggcggcgtgctg
gtgaccagcgcatcgtacgaagccggttccttcgacatccacaagcttcacgcgggcaac
ctgctgtggcaaagccggctggtcttcgacagtctggtctatctggacagcgcaggcgcc
gcgatgccatggctggcgaagtcgtggacggtatcgcccgatggccgcgtggtcactttc
cggctgcgcgaggatgtgacgttcagcgatggcacgcgtttcgatgcggaagcggtacgg
atcaacttcgagcggatcaagaaactcggcacgcaatcgcgcatcgcggccgcctatctg
tcgccgtacgtggaaggggtcgcagtcgatacgtacaccttcgaggcaaggctcgacgcg
ccgtacccggcgttcctgtcgtttcttgcccagacgtggctgggcttcatctcgccacgc
cagatcagcggcgatccggccagcatcggcgaacgcccggtgggcaccgggccgttcgtg
gtaacggagtacgcgccgggcaagcgggccgtgctggcaaggcgagccgactacgcgtgg
gcgcccgactatctccgccatgcggggcccgcctacctggacggcatcgtcatcgaagcc
gtacccgacgacgcggcccgcaccgccagcctgcagcagggccggcaccagctgaccttc
gaggcgccgctgacggatgggcagcgcttgcgggccgatcccggtctcgtgttctacaac
agggtgcggccggggagcccgatgcgcagcctggcattcaacaccgcacgcttcccgttc
gacgatgtccgcatccgccgcgccgcggcgatcgccatcgaccgcgagcgcgtgacgcgc
gagctcagcgcgggagaattcatcgcgaaagccgattacctcggcaccaacacgcccggg
tatgtggacacgtaccggcatgtgctggcctacgacccggcgggcgccgcggcgttgctc
gaccaggccggctggacggaacgggaccgggatggcatccgcagcaagggtggccggcgc
ctgagcgcggagctgctgacgaccggcgacgaaagaacgccgcccgcatcggtgctggcc
atccagtccggcctgaaggcggtgggcatcgagctgcgcctgaaacctgtcgccggggcc
gacctgcccgccgccgtgcgcgcgggcgcctacgatgcgctgaccggcggctggtggtcg
gcggcgacaccggatgtcctgttcctgctgtatcacagcagccagaccgcccggcagaac
accttcgggcaggataccggccgcatcgccgatccggtactggacgacctgctgcttcgc
gcccgccggtcccgcgatgcgaacgaacgcgatgcgctgtatcgccaggcgcaaaagctg
ctgacggaactggtgccggtcgtgccgctgcatgaaagccatcacctggtcgcctactcg
cggcagctgaagggcgtgctgttcgacaccacgcacaatacgccgatcctgacgggggcg
tggctggcgccggcggaggaggtggcaaaagagcgttga
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