Pseudoduganella albidiflava: EYF70_12565
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Entry
EYF70_12565 CDS
T05903
Symbol
hpnD
Name
(GenBank) squalene synthase HpnD
KO
K02291
15-cis-phytoene synthase [EC:
2.5.1.32
]
Organism
mali
Pseudoduganella albidiflava
Pathway
mali00906
Carotenoid biosynthesis
mali01100
Metabolic pathways
mali01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
mali00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00906 Carotenoid biosynthesis
EYF70_12565 (hpnD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
mali01006
]
EYF70_12565 (hpnD)
Enzymes [BR:
mali01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.32 15-cis-phytoene synthase
EYF70_12565 (hpnD)
Prenyltransferases [BR:
mali01006
]
Terpene biosynthesis
Squalene/phytoene synthase
EYF70_12565 (hpnD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-ProteinID:
QBI01590
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All DBs
Position
complement(3030154..3030987)
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AA seq
277 aa
AA seq
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MSPDDYCQQKAAASGSSFYYSFLFLPPERRRAITALYAFCREVDDTVDECSDESLARIKL
AWWRTEMAAMYEGKPSHPVTKALQPHVAPYGLQQEHMQAIIDGMEMDLNQTRYLDYAGLS
KYCWHVAGVVGILSASIFGATRPETLRYAEKLGHAFQLTNIIRDVGEDARKGRIYLPINE
LQQFGVTAADLLNARHTDNFTKLMAFQAERAQRSYEEAFALLPKEDRRAQRPGLIMAAIY
RTVLDEIERDGYHVLTQRISLTPIRKLWLAWKTYVRG
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atgtctcccgacgattactgccagcagaaagccgccgccagcggctcgagtttctattac
agcttcctgttcctgccgcccgaacggcgccgcgcgatcacggcgctgtatgcgttctgc
cgcgaagtcgatgacacggtcgacgaatgcagcgacgaatcgctggcccgcatcaagctg
gcctggtggcgcaccgagatggccgccatgtacgagggcaagcccagccacccggtcacc
aaggccctgcagccgcacgtggcgccgtacggcctgcagcaggaacacatgcaggccatc
atcgacggcatggaaatggacttgaaccagacccgctacctcgactacgcgggcctgtcg
aaatactgctggcacgtggccggggtggtcggcatcctgtcggccagcatcttcggcgcc
acgcgcccggaaacgctgcgctacgccgagaaactgggccacgccttccagctgacgaac
atcatccgcgacgtgggcgaggatgcccgcaagggccggatctacctgccgatcaacgaa
cttcagcagttcggcgtgacggcggcggacctgctgaacgcccgccacacggacaatttc
acgaagctgatggccttccaggccgagcgcgcccagcgttcgtacgaagaagctttcgcc
ctgctgcccaaggaagaccgccgcgcccagcgcccgggcctgatcatggcggccatctac
cgcaccgtgctcgacgagatcgagcgcgacggctaccacgtgctcacgcagcgcatttcg
ctgacgccgatccgcaaactgtggctggcctggaagacctacgtccgcggatga
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