Pseudoduganella albidiflava: EYF70_12575
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Entry
EYF70_12575 CDS
T05903
Name
(GenBank) efflux RND transporter periplasmic adaptor subunit
KO
K18302
membrane fusion protein, multidrug efflux system
Organism
mali
Pseudoduganella albidiflava
Module
mali_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
mali00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
mali02000
]
EYF70_12575
01504 Antimicrobial resistance genes [BR:
mali01504
]
EYF70_12575
Transporters [BR:
mali02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
EYF70_12575
Antimicrobial resistance genes [BR:
mali01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
EYF70_12575
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HlyD_D23
HlyD_3
Biotin_lipoyl_2
Biotin_lipoyl
YqfD
SH3_19
Motif
Other DBs
NCBI-ProteinID:
QBI05008
LinkDB
All DBs
Position
3032187..3033296
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AA seq
369 aa
AA seq
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MKPYLIAAVAVLLAACSEAPEKAADVRPVRAIVLQSSDVDVNAEFSGEVRARYQSQLAFR
VPGKIVSRKVDVGTSVRKGQALMQLDPQDLRLGQAQSLATLRAAETTRDLAAADVKRYRE
LRAQNFVAQAVLDEKESALRAAEAQVDAARAGYREQSNQTGYANLVADMDGVVTQVAAEA
GQVVAAGTPVVTVARTDDKEVVFGVPEDRVDALRQMSDVHVRLWAAPGQAVPAKIREVSP
VADPATRTYAFKVTLPPTLTQAKLGMTAVVQFASKGQPKIKVPLSALFHERNATSVWVVE
NGAVKLVPVTVVAADGNELVLGSGVSTGQTVVTAGVHLLKPGQKVRILGADVPRAPVPKG
AAPAAEGAR
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
ctgaagccctacctgatcgcggcggtcgccgtgctgctggccgcctgctcggaagcgccg
gaaaaagccgccgatgtgcggccggtgcgcgccatcgtgctgcagagttccgacgtggac
gtgaacgcggaattctccggcgaggtacgcgcccgctaccagtcgcaactggcgttccgc
gtgccgggcaagatcgtttcgcgcaaggtcgacgtgggcaccagcgtgcgcaagggccag
gcgctgatgcagctcgacccgcaggatctgcggctgggccaggcgcaatcgctggccacg
ctgcgcgccgcggaaaccacccgcgacctggcggcggcggacgtgaagcgctatcgcgaa
ctgcgcgcgcagaacttcgtggcccaagcggtactggatgaaaaggaatcggcgctgcgc
gcggccgaggcgcaggtggacgcggcacgcgccggctaccgcgagcagtcgaaccagacg
ggttacgcgaacctggtggcggacatggatggcgtggtcacgcaggtggcggcggaggcc
ggccaggtggtcgccgccggaacgcccgtggtgacggtggcccgcacggatgacaaggaa
gtggtgttcggcgtgccggaagaccgcgtcgatgcgctgcgccagatgagcgacgtgcat
gtgcgcctgtgggccgcgcccggccaggcggtgccggcgaagatccgcgaagtgtcgccg
gtggccgatcccgccacgcgcacgtacgccttcaaggtgacgctgccgccgacgctcacg
caggccaagctgggcatgacggcggtggtgcagttcgcgtcgaaggggcagccgaagatc
aaggtgccgctgtccgcgctgttccacgaacgcaatgccacgtccgtctgggtggtcgag
aacggcgccgtgaagctggtgcccgtcaccgtggtggccgccgatggcaacgagctggtg
ctgggcagcggcgtgagcaccggccagacggtcgtcacggccggcgtgcacctgctcaag
ccgggccagaaggtgcgcattctcggcgcggacgtgccgcgcgcgccggtgccgaagggc
gccgcgcctgccgccgagggggcgcgatga
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