Pseudoduganella albidiflava: EYF70_13220
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Entry
EYF70_13220 CDS
T05903
Name
(GenBank) OsmC domain/YcaO domain-containing protein
KO
K09136
ribosomal protein S12 methylthiotransferase accessory factor
Organism
mali
Pseudoduganella albidiflava
Brite
KEGG Orthology (KO) [BR:
mali00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mali03009
]
EYF70_13220
Ribosome biogenesis [BR:
mali03009
]
Prokaryotic type
ribosomal protein modification factors
EYF70_13220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YcaO_C
YcaO
OsmC
Motif
Other DBs
NCBI-ProteinID:
QBI01702
LinkDB
All DBs
Position
3186863..3189067
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AA seq
734 aa
AA seq
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MEIKVNFLDKLRLEAKFDDFTVIADQPIRYKGDGSAPGPFDYFLASSALCAAYFVKLYCS
TRNIPTENIRLSQNNIVDPENRYQQIFKIQVELPADISAKDREGILRSIDRCTVKKVVQA
GPEFIIEEVENLDADAQALLTVNPDTATTTYIPGKDLPLEQTIANMSGVLARLGIKIEIA
SWRNIVPNVWSLHIRDAHSPMCFTNGKGSTKESALASALGEYIERLSCNHFYAGVFWGED
IANAPFVHYPEERWFKPRRGDKLPAEILDEYCLDIYDPDGELRGSHLVDTNSGNVERGIC
SLPYVRRSDGETVYFPSNLIENLFVSNGMSAGNTLVEAQVQCLSEIFERAVKREIIEGEI
ALPDVPADVLAKYPGIVAGIKGLEEQGFPVLVKDASLGGKYPVMCVTLMNPRTGGVFASF
GAHPSLQVALERSLTELLQGRSFEGLNDLPQPTFASNAVTEPNNFVEHFIDSSGIVSWRF
FSAKADYDFVEWDFSGHGDNSNAEEAEALFGILADMGKEVYTAVYDHLGATACRILVPGY
SEIYPVDDLVWDNTNVALQFRADILNLHSLDDAALEALLERLEESELDDYTDIATLIGID
FDENTDWGQLTIQELKLLINLALKEYEEAHELVGAFLQYNDNTAERRLFYQAMNVVLEVV
LNEDLELDDYVVNFRRMFGDARMDAVLGSVDGTVRFHGLTPTSMKLEGLDRHERLLDSYR
KLHKARAAAAAATR
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atggaaatcaaggtcaactttctcgacaagcttcgcctggaagccaagttcgacgatttc
acggtcattgccgaccagccgatccgctacaagggcgatggctcggcgcctggtccgttc
gattacttcctggcctcgtcggccttgtgcgcggcctatttcgtgaagctgtattgctcg
actcgcaatatcccgaccgagaatatccgtctgtcgcagaacaatatcgtcgacccggaa
aaccgctaccagcagattttcaagatccaggtggaactgccggcggacatctccgccaag
gaccgcgaagggatcctgcgctcgatcgaccgctgcactgtcaagaaagtggtgcaggcc
ggccccgagttcatcatcgaggaagtggagaacctggacgccgatgcgcaggccttgctg
acggtgaatccggatacggcgaccaccacttacattcccggcaaggacctgccgctggaa
cagaccatcgccaacatgtccggcgtgctggcccggctggggatcaagatcgagatcgcc
tcgtggcgcaatatcgtgcccaatgtctggtcgctgcatatccgcgatgcgcactcgccg
atgtgcttcaccaacggcaagggctcgaccaaggaaagcgcgctggcatcggcgctgggc
gagtacatcgagcgactgagctgcaaccacttctacgccggcgtgttctggggcgaggat
atcgccaacgcacccttcgtgcactatccggaagagcgctggttcaagccgcgccgcggc
gacaagctgccggccgagatcctcgatgaatactgcctggatatctacgatccggatggc
gaattgcgcggctcgcacctggtcgacaccaactccggcaacgtggagcgcggcatctgc
tcgctgccgtatgtgcggcgctccgatggcgagacggtgtacttcccgtccaacctgatt
gaaaacctgttcgtcagcaacggcatgagcgccgggaacacgctggtcgaagcgcaggtg
caatgcctgtccgagattttcgaaagggcggtcaagcgagagatcatcgaaggcgaaatc
gccttgcccgacgtcccggccgacgtgctggcgaagtatccgggcatcgtcgctggcatc
aagggcctggaagagcagggtttcccggtgctggtgaaggatgcgtcgctgggcggaaag
tacccggtcatgtgcgtcacgctgatgaatccccgcacgggcggcgtgttcgcctcgttc
ggcgcgcatccgagcctgcaggtggcactggagcgcagtctcaccgaattgctgcaaggg
cgcagcttcgagggcttgaacgatctgccgcaacccacgttcgccagcaacgcggtgacg
gagccgaacaacttcgtcgaacacttcatcgattccagcggcatcgtgtcgtggcgcttc
ttcagcgccaaggccgactacgacttcgtcgagtgggatttctccggccacggcgacaac
tcgaatgccgaggaagccgaagcactgttcggcatcctggccgacatgggcaaggaagtc
tatacggcggtgtacgaccacctcggtgccaccgcatgccggatcctggtgcctggctat
tcggaaatctatccggtcgacgatctggtgtgggataacacgaacgtcgcgctgcagttc
cgcgccgatatcctgaacctgcattcgctggacgatgccgcgctggaagccctgctcgag
cgcctggaagagagcgagctggacgactacacggacatcgccacgctgatcggcatcgac
ttcgacgagaacaccgactggggccagctgacgatccaggagctcaagctgctgatcaac
ctcgccctgaaagagtacgaggaggcgcacgagctggtgggcgccttcctgcaatacaac
gacaacacggcggagcgccggctgttctaccaggccatgaacgtcgtgctcgaagtggtg
ttgaacgaagacctggaactggatgattacgtcgtcaatttccgccggatgtttggcgac
gcgcgcatggacgcggtgctgggatcggtggacggcacggtgcggttccatggcctgacg
ccgaccagcatgaagctggaaggcctcgaccgtcacgagcggctgctcgacagctaccgg
aaactgcacaaggcgcgggctgccgcggcggctgcgacgcgctga
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