Pseudoduganella albidiflava: EYF70_16145
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Entry
EYF70_16145 CDS
T05903
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
mali
Pseudoduganella albidiflava
Brite
KEGG Orthology (KO) [BR:
mali00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mali03016
]
EYF70_16145
Enzymes [BR:
mali01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
EYF70_16145
Transfer RNA biogenesis [BR:
mali03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
EYF70_16145
Prokaryotic type
EYF70_16145
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Anti-Pycsar_Apyc1
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
QBI02211
UniProt:
A0A411WZS8
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All DBs
Position
complement(3914139..3915131)
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AA seq
330 aa
AA seq
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MELQFLGTSSGTPTRTRNVAGVALRTAGGWVLVDCGEGTQHRILRTPLSPHDLRAIFITH
LHGDHCYGLPGLLASAGLLNRTAPLAIVGPAPLERYVRGVMETTALQLPYPVEFIDVAGA
AGGLLDAGLLSDLAVDTAALSHRIPSYAYGFTEKTVERRLDAARLAAAGVPRGPLWGVLQ
AGDDVTLPDGRRVRSADVLQPPRRPRRIVIAGDNDTPGLLADAVRDADVLVHEATYTQAI
LDKVGPGPQHSSARMVARFAREAAIPNLVLTHFSPRYQDPESVRPGALALADVEAEARAE
YAGHLFMARDLARLALDKQGMLSEVPGAGA
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atggaactgcaatttctcggcacctcatcgggcactcccaccaggacgcgcaacgtggcc
ggcgtggcgctgcgcacggcgggcggctgggtgctggtcgattgcggggaaggcacgcag
caccgcatcctgcgcacgccgctgtcgccgcacgacttgcgagcgatcttcatcacgcac
ctgcacggcgaccattgctatggcttgccggggctgctggccagcgccggcctgctgaac
cgcacggcgccgctggcgatcgtgggcccggcgccgctggagcgctacgtgcgcggcgtg
atggagaccaccgccctgcagctgccgtatccggtcgagttcatcgacgtggccggcgcg
gccggcggcctgctggatgccggcctgctgtccgacctggccgtcgataccgccgcgctg
tcgcaccgtatcccgtcgtatgcctatggtttcacagaaaaaaccgtcgaacgccggctc
gatgccgcaaggctggcggcggccggcgtgccgcgtgggccgctgtggggcgtgctgcag
gccggggacgacgtgacgctgccggatggccggcgggtgcgctcggcggatgtgctgcag
ccgccgcgccgcccgcgccgcatcgtgatcgccggcgacaacgacacgcccggcctgctg
gccgatgccgtgcgcgatgccgatgtgctggtgcatgaagccacgtacacccaggccatc
ctggataaggtggggcccggcccgcagcacagttcggcgcggatggtggcgcggtttgcc
cgcgaggcggccattccgaacctggtgctgacccatttcagcccccgctaccaggacccg
gaaagcgtgcgccccggtgcgctggcgctggccgacgtggaggccgaggcccgcgccgag
tatgcgggacacctgttcatggcgcgcgacctggcccgcctcgcgctggacaagcaagga
atgttgtcggaagtgcctggcgctggtgcataa
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