Pseudoduganella albidiflava: EYF70_17305
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Entry
EYF70_17305 CDS
T05903
Name
(GenBank) HAMP domain-containing protein
KO
K03406
methyl-accepting chemotaxis protein
Organism
mali
Pseudoduganella albidiflava
Pathway
mali02020
Two-component system
mali02030
Bacterial chemotaxis
Brite
KEGG Orthology (KO) [BR:
mali00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EYF70_17305
09140 Cellular Processes
09142 Cell motility
02030 Bacterial chemotaxis
EYF70_17305
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
mali02035
]
EYF70_17305
Bacterial motility proteins [BR:
mali02035
]
Flagellar system
Chemotaxis proteins
MCPs
EYF70_17305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCPsignal
4HB_MCP_1
HAMP
CHASE3
SKA1
Snf7
HAMP_2
Nup54
Tweety
Motif
Other DBs
NCBI-ProteinID:
QBI02403
UniProt:
A0A411X0D0
LinkDB
All DBs
Position
complement(4219856..4221475)
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AA seq
539 aa
AA seq
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MRVKDLSIAKRLGMGFGVVSVLLVFQIVMSNIMLGRMDASTDAIVHDRMPKILATKDMLL
EVNDIAIALRNMILTPVAADRTAQMDEVKASRTAIAAILGSLDGSIKRPEARALLEQVRK
DMDTYVAGQDRLVQLVNDGNPDAARALLSTELRPLLARLKGEANDLVSFQKGLSDEAAAA
AAATHTESRLVSIVIGVLAVAFAGGVAWWITSSIVRPVRRALEVANTVAAGDLTSQIDVE
TADEMGQLLQAMKAMNDSLAQTVATVRSGTDTIATAAAEVASGSQDLSARTEQQASSLEE
TASSMEELTSTVKQSADNARQANSLAENASTIATRGGDVIGQVVTTMDDIRASAAKIGDI
TSVIDSIAFQTNILALNAAVEAARAGEQGRGFAVVASEVRNLAQRSAAAAREIKQLIGDS
TEKVANGAALVAQAGATMSEIVSSVNRVTGIMGEITTASAEQTAGIEQINQAVGEMDSMT
QQNAALVEQAAAASETMSEQAGKLAEAVSVFRLRSAHAPLRSDAGRPSSPARHPRLAMS
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
gtgagagtcaaagatttgtcgattgccaagagactgggcatgggattcggcgtcgtgagc
gtcttgctcgttttccagatcgtgatgagtaacatcatgcttgggcgcatggatgcgagc
accgatgcgatcgtgcatgaccggatgccaaagatcctggcgaccaaggacatgcttctg
gaagtgaacgatatcgccatcgctttgcgcaatatgatactgacgcccgtcgcagccgac
cggacagcgcagatggacgaagtcaaggcgtcgagaaccgcgatcgccgccatcctgggc
tcgctggatggatcgatcaagcgacccgaggcacgggcactgctggaacaggtcaggaag
gatatggatacctacgtcgctggccaggatcggctggtccagctcgtcaacgacggaaat
cccgacgcggcgcgggcgctgttgagcacggagctccggcccttgctggcgcgcctcaag
ggtgaggcaaatgacctggtcagcttccagaaggggttgagcgatgaggcggccgcagcc
gccgcggcaacgcacaccgagtcgagattagtttccatcgtcatcggcgtgctcgccgtc
gcctttgctggcggcgtggcctggtggatcacgtcgtcgatcgtgcgacccgtgcgccgc
gccctggaagtcgccaatactgtcgctgctggcgacttgaccagccagatcgacgtcgag
acggcggatgaaatggggcagttgctgcaggcgatgaaagcgatgaacgacagcctggcg
cagacggttgcgacggttcggtcgggtaccgacacgatcgcgaccgcggcggcggaggtg
gcttccggcagccaggacctgtcggcgcgcacggagcagcaggccagctcccttgaagag
acggcgtcgtcgatggaagagctgacgtcgaccgtgaagcagagcgccgacaatgcccgc
caggcaaactcgctcgcggagaatgcttccaccatcgctaccaggggcggcgacgtgatt
ggacaggtcgtcacgaccatggacgatatccgtgcctcggcggcgaagatcggcgacatc
accagcgtcatcgacagcatcgcgttccagaccaatatccttgcgctcaacgcggctgtc
gaagctgcgcgcgccggcgagcagggacggggcttcgccgtggtggcaagcgaggtgcgg
aacctggcgcagcgttccgcggcagccgccagggaaatcaagcagctgatcggcgattcg
acggaaaaggtcgccaacggtgccgcgctggtagcgcaggccggcgccacaatgtcggaa
atcgtctcgagcgtaaatcgtgtcactggcatcatgggcgagatcaccacggccagcgcc
gagcagactgcggggatcgaacagatcaaccaggcggtgggagagatggattcgatgacc
cagcaaaacgccgcactggtcgagcaggccgcggcggcatccgaaaccatgagcgagcag
gctggcaagctggcggaggcggtgtcggtattccgtcttcgctccgcgcacgcgccgctg
cgcagcgatgccggacgcccttcgtcaccggcgaggcatccacgactggcaatgagctga
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