Pseudoduganella albidiflava: EYF70_17610
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Entry
EYF70_17610 CDS
T05903
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
mali
Pseudoduganella albidiflava
Pathway
mali03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mali00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
EYF70_17610
09124 Replication and repair
03420 Nucleotide excision repair
EYF70_17610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mali03021
]
EYF70_17610
03036 Chromosome and associated proteins [BR:
mali03036
]
EYF70_17610
03400 DNA repair and recombination proteins [BR:
mali03400
]
EYF70_17610
Enzymes [BR:
mali01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
EYF70_17610
Transcription machinery [BR:
mali03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
EYF70_17610
Chromosome and associated proteins [BR:
mali03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
EYF70_17610
DNA repair and recombination proteins [BR:
mali03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
EYF70_17610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
QBI02455
LinkDB
All DBs
Position
4284960..4287284
Genome browser
AA seq
774 aa
AA seq
DB search
MGAAMTDAAPRPVAQYTVAVRALCEFTAKAGDLDLRFTPSPTAQEGIAGHGVVTSRRDDD
YQREIALTGDFGPLHVRGRADGYDPKRNQLEEIKTFRGELERMPGNHRALHWAQLKVYGH
LLCAARALPSLRLALVYYDIGSQKETHLVEEHSAAALQAYFEEQCGRFLAWAEAELAHRA
ARDEQLQALRFPHADFRPGQRELAEAMYKASTRSCALLAQAPTGIGKSIGSLFPMLKAAA
AHGHDKIFFLAAKTSGRRMALDAVENIKEGAPLLPLRTLELAARNTACEHPDKSCHGESC
TLAKGFYDRLPAARAAAVQQPMLDRAGVRAVALAHDVCPYYLQSELVRWADVIVGDYNYY
FDVTAMLYSLTVMNDWRIAILADEAHNMVSRARKMYSAELEHGGLRLLRKTAPAAIKKAL
DRVHRQWSALEKEQMAEHGGEYRAYEALPEKLVNALQTAATEIGDYMAENPAWFDADVLD
FYFAVLHFARLAENFGEHSVFDVTISTGGKNHGGGTRADSVLCLRNIVPAPFLQPRFAAA
RTTALFSATLSPWNYYSDTLGMPADTAWVDVASPFQAAQLTVHIAGHISTRYQHRDRSLA
PIAQLMGEQYGRQPGNYLAFFSSFDYLDKAADLFQREHPHVTVWRQPRRMGEAEREAFLA
RFTETGQGIGFAVLGGAFGEGIDLPGARLIGAFIATLGLPQLNPVNERIRERMQAIFGAG
YDYTYLYPGLQKVVQAAGRVIRTTSDTGTVYLIDDRFARPEIRALLPAWWHVPG
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgggcgccgcaatgacggatgcggcaccgcgtcccgtggcgcagtacacggttgccgtg
cgcgcgctgtgcgaattcaccgccaaggccggcgacctggacctgcgcttcacgccctcg
cccaccgcgcaggaaggcatcgccggccatggcgtggtgacttcccggcgcgacgacgac
taccagcgcgagatcgccttgacgggcgatttcggcccgctgcacgtgcgcggccgcgcc
gacggctacgacccgaagcgcaaccagctggaggaaatcaagaccttccggggcgagctg
gaacgcatgcccggcaaccatcgcgccttgcactgggcgcagctgaaggtgtacggccac
ctgctgtgcgcggcgcgcgccctgccatcgctgcgcctggcgctggtctactacgatatc
ggttcgcagaaggaaacccatctcgtcgaggaacacagtgcggcggcgctgcaggcgtat
ttcgaagagcagtgcggccggttcctggcctgggccgaagccgaactggcgcatcgcgcc
gcgcgcgacgagcagttgcaggccctgcgctttccgcatgccgatttccggcccggccag
cgcgaactggccgaagcgatgtacaaggccagcacccgatcgtgcgcgctgctggcgcag
gcgccgaccggcatcggcaagagcatcggcagcctgttcccgatgctgaaggcggccgcc
gcgcatggtcacgacaagatcttcttcctggccgcgaagacatccgggcggcgcatggcc
ctcgacgcggtcgagaacatcaaggaaggcgccccgctgctgcccttgcgcacgctggaa
ctggcggcccgcaacacggcatgcgaacatccggacaagtcctgccacggcgaatcctgc
acgctggcgaagggtttttatgaccgcctgccggccgcgcgcgccgcggcggtgcaacag
ccgatgctcgaccgcgccggcgtgcgcgcggtggcgctggcgcacgacgtgtgcccgtac
tacctgcaaagcgagctggtacgctgggccgacgtgatcgtcggcgactacaactattat
ttcgacgtgaccgccatgctgtactcgctgacggtgatgaacgactggcgtatcgccatc
ctggccgacgaggcgcacaacatggtctcgcgcgcccgcaagatgtattcggcggaactg
gagcacggcggcctgcggctgctgcgcaagaccgcgccggccgcgatcaagaaggcgctg
gaccgcgtgcaccggcaatggtcggcgctggaaaaggaacagatggcggagcatggcggc
gagtaccgggcctacgaggccctgccggaaaagctggtcaatgcgctgcagaccgccgcc
accgagatcggcgactacatggcggagaaccccgcatggttcgatgccgacgtactggat
ttttatttcgccgtgctgcatttcgcccggctggccgagaacttcggcgagcattccgtg
ttcgatgtgacgatatcgacaggcggcaagaaccatggcggcggcacccgtgccgactcg
gtgctctgcctgcgcaatatcgtgccggcgccattcctgcagccgcgtttcgcggcggcg
cgcaccacggcgctgttctcggccacgctcagcccgtggaattactacagcgacacgctg
ggcatgccggccgataccgcgtgggtcgacgtggcctcgcccttccaggccgcgcagctg
acggtgcatatcgccggccacatctccacccgctaccagcaccgcgaccgctcgctggcg
ccgatcgcgcagctgatgggcgaacagtacgggcgccagcccggcaactacctggccttc
ttcagcagcttcgactacctggacaaggcggccgacctgttccagcgcgagcacccgcac
gtgacggtatggcgccagccgcgccggatgggcgaggcggaacgcgaagccttcctggcc
cgcttcaccgaaacgggccagggcatcgggttcgccgtgctgggcggggcattcggcgaa
ggcatcgacctgcccggtgcgcggctgatcggcgcgttcatcgccacgctggggctgccg
cagctgaatcccgtcaacgagcggatccgcgaacggatgcaggccatcttcggcgccggc
tacgactacacgtacctgtatccgggcttgcagaaagtggtgcaggccgccggccgcgtg
atccgcaccaccagcgataccggcaccgtgtacctgatcgacgaccgcttcgcccggccc
gagatccgcgcgctgctgccggcctggtggcacgtgcccggctga
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