Pseudoduganella albidiflava: EYF70_17710
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Entry
EYF70_17710 CDS
T05903
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
mali
Pseudoduganella albidiflava
Pathway
mali00220
Arginine biosynthesis
mali00240
Pyrimidine metabolism
mali00250
Alanine, aspartate and glutamate metabolism
mali01100
Metabolic pathways
mali01110
Biosynthesis of secondary metabolites
mali01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
mali00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
EYF70_17710 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
EYF70_17710 (carB)
00220 Arginine biosynthesis
EYF70_17710 (carB)
Enzymes [BR:
mali01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
EYF70_17710 (carB)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATP-grasp_3
ATP-grasp_4
ATP-grasp_5
ATPgrasp_Ter
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
QBI02471
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Position
complement(4305076..4308306)
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AA seq
1076 aa
AA seq
DB search
MPKRSDIKSILIIGSGPIVIGQACEFDYSGAQACKALREEGYKVILVNSNPATIMTDPEM
ADVTYIEPITWQVVERILAKERPDAILPTMGGQTALNCALDLHNNGVLAKYNVELIGATP
EAIDKAEDRSKFKDAMTKIGLGSARSGIAHSMDEAWKVQREMGFPTIIRPSFTMGGSGGG
IAYNEEEFEQICKRGLEASPTSELLIEESLLGWKEYEMEVVRDKADNCIIICSIENLDPM
GVHTGDSITVAPAQTLTDKEYQIMRNASLAVLREIGVDTGGSNVQFSINPKDGRMIVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGFTLDELRNEITGGATPASFEPSIDYVVTKIP
RFAFEKFPTADDHLTTQMKSVGEVMAMGRTFQESFQKALRGLEVGVDGLNQKTVDREKLE
EELGEPGPERIWYVGDAFAQGFTMEEVHNLTKIDPWFLVQIKEIVDLELWLDTQKLENLD
KNTLYRLKQKGFSDRRLAYLLQTTDTAVREQRRALGIRPVYKRVDTCAAEFATNTAYMYS
TYDEECESNPTDKKKIMVLGGGPNRIGQGIEFDYCCVHAALAMREDGYETIMVNCNPETV
STDYDTSDRLYFESLTLEDVLEIVDLEKPVGVIVQYGGQTPLKLALDLERNGVPIVGTSP
DMIDAAEDRERFQKLLQDLELRQPPNRTARTEEEALKLAQEIGYPLVVRPSYVLGGRAME
IVHEQRDLERYMREAVKVSNDSPVLLDRFLNDAIECDVDCISDGETTFIGGVMEHIEQAG
VHSGDSACSLPPYSLSQETIDELKRQTALMAKGLNVVGLMNVQFAIQKQEIDGVEKDVVF
VLEVNPRASRTVPFVSKATGLQLAKIAARCMVGQTLSSQGITTEVVPPYYSVKEAVFPFV
KFPGVDTILGPEMKSTGEVMGVGQTFAEAFVKSQLGAGVKLPKSGKVFLSVKASDKPRAV
KVARDLVEAGFSLVATKGTAAVISAAGIPVTPVNKVVEGRPHVVDMIKNHEIALVINTVE
EKRSAIVDSRAIRTSALQSRVTTYTTIAGAEAAVAGIRHLDELQVYDLQGLHKTLN
NT seq
3231 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaacgttctgacatcaaaagcatcctgattatcggctccggcccgatcgtgatc
ggccaggcctgcgaattcgactactccggcgcgcaagcctgcaaggcgctgcgcgaagag
ggttacaaagtcatcctggtgaacagcaacccggcgacgatcatgaccgaccccgaaatg
gcggacgtcacgtacatcgagccgatcacctggcaagtggtggagcgcatcctggcgaag
gaacgcccggacgcgatcctgccgaccatgggcggccagaccgcgctgaactgcgcgctc
gacctgcacaacaacggcgtgctggccaagtacaacgtggagctgattggcgccacgccg
gaagcgatcgacaaggcagaggaccgttccaagttcaaggacgcgatgaccaagatcggc
ctgggttcggcccgttccggcatcgcccactcgatggacgaagcctggaaagtgcagcgc
gagatgggcttcccgaccatcatccggccatcgttcacgatgggcggcagcggcggcggc
atcgcctataacgaggaagagttcgagcagatctgcaagcgcggcctggaagcatcgccc
accagcgagctgctgatcgaagagtcgctgctgggctggaaagagtacgagatggaagtg
gtgcgcgacaaggcggacaactgcatcatcatctgctcgatcgagaacctggacccgatg
ggcgtgcacaccggcgactcgatcaccgtggcgccggcgcagacgctgaccgacaaggaa
taccagatcatgcgcaacgcctcgctggcggtgctgcgcgagatcggcgtggacacgggc
ggctcgaacgtgcagttctcgatcaatccgaaggacggccgcatgatcgtcatcgagatg
aatccgcgcgtatcgcgttcttccgcgctggcctcgaaggcgaccggcttcccgatcgcc
aaggtggccgcgaaactggcggtgggcttcacgctcgacgagctgcgcaacgagatcacc
ggcggcgcgaccccggcgtcgttcgagccgtcgatcgactatgtcgtgacgaagatcccg
cgctttgcgtttgaaaaattcccgaccgccgacgaccatctcaccacgcagatgaaatcg
gtgggcgaggtgatggcgatgggccgcacgttccaggaatcgttccagaaggccctgcgc
ggcctggaagtgggcgtcgatggcctgaaccagaagacggtggaccgcgagaagctggaa
gaggaactgggcgagccgggtccggaacgcatctggtacgtgggcgacgcgttcgcccag
ggcttcacgatggaagaagtgcacaacctgaccaagatcgatccgtggttcctcgtgcag
atcaaggaaatcgtcgacctggaactgtggctggacacgcagaaactggagaacctggac
aagaacacgctgtaccgcctgaagcagaagggcttctcggaccgccgcctggcctacctg
ctgcagaccaccgataccgccgtgcgcgaacagcgacgcgcgctgggcatccgcccggtg
tacaagcgcgtggacacctgcgccgccgaattcgccaccaacaccgcgtacatgtactcc
acgtacgacgaggaatgcgaatcgaacccgaccgacaagaagaagatcatggtgctgggc
ggcggcccgaaccggatcggccaggggatcgagttcgactactgctgcgtgcacgccgcg
ctggcgatgcgcgaggatggctacgagaccatcatggtcaactgcaacccggaaaccgtg
tcgaccgactacgacacgtcggaccgcctgtacttcgaatcgctgacgctggaagacgtg
ctggaaatcgtcgacctggaaaagccggtcggcgtgatcgtgcagtacggtggccagacg
ccgctgaagctggccctcgacctggaaaggaacggcgtgccgatcgtcggcacctcgccg
gacatgatcgacgcggccgaagaccgcgagcgcttccagaagctgctgcaggacctggaa
ctgcgccagccgccgaaccgcaccgcgcgcacggaagaagaagccctcaagctggcgcag
gaaatcggctacccgctggtggtgcgtccttcctacgtgctgggcggccgcgcgatggaa
atcgtgcacgagcagcgcgacctggagcgctacatgcgcgaagcggtgaaggtgtcgaac
gattcgccggtgctgctggaccgcttcctgaacgacgcgatcgagtgcgacgtggattgc
atctccgatggcgagaccaccttcatcggtggcgtgatggaacacatcgagcaggccggc
gtccactcgggcgactcggcatgctcgctgccgccatactcgctgtcgcaggaaaccatc
gatgaactgaagcggcagaccgcgctgatggccaagggcctgaacgtggtcggcctgatg
aacgtgcagttcgcgatccagaagcaggagatcgatggcgtcgagaaggatgtcgtgttc
gtgctggaagtgaacccgcgcgcctcgcgcacggtgccgttcgtgtcgaaggcgaccggc
ctgcagctggcgaagatcgccgcgcgctgcatggtgggccagaccctgtcgtcgcaaggc
atcacgaccgaagtcgtgccgccgtactacagcgtcaaggaagccgtgttcccgttcgtg
aaattcccgggcgtggacaccatcctcggcccggaaatgaagtcgaccggcgaagtgatg
ggtgtgggccagacgttcgcggaagcgttcgtgaaatcccagctgggcgccggcgtgaag
ctgccgaagtccggcaaggtgttcctgtcggtgaaggcatcggacaagccgcgcgccgtg
aaagtggcacgcgacctggtcgaggctggcttctcgctggtggccaccaagggcaccgcg
gcggtgatctcggcggcgggcattcccgtcacgccggtcaacaaggtggtcgagggccgt
ccgcacgtggtcgacatgatcaagaaccacgagatcgcgctggtcatcaacacggtcgag
gaaaagcgcagcgccatcgtcgattcgcgggcgatccgcacgtcggcactgcagtcgcgc
gtgacgacgtacacgacgatcgcgggcgccgaggccgcggtggccggtatccgccacctg
gacgagttgcaggtgtacgatttacaagggctgcataaaaccttaaactaa
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