Pseudoduganella albidiflava: EYF70_19990
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Entry
EYF70_19990 CDS
T05903
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
mali
Pseudoduganella albidiflava
Pathway
mali03030
DNA replication
mali03430
Mismatch repair
mali03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mali00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
EYF70_19990
03430 Mismatch repair
EYF70_19990
03440 Homologous recombination
EYF70_19990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mali03032
]
EYF70_19990
03400 DNA repair and recombination proteins [BR:
mali03400
]
EYF70_19990
Enzymes [BR:
mali01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
EYF70_19990
DNA replication proteins [BR:
mali03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
EYF70_19990
DNA repair and recombination proteins [BR:
mali03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
EYF70_19990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
AAA_16
RuvB_N
AAA_22
AAA_14
DNA_pol3_tau_5
AAA_18
AAA_30
AAA_5
AAA_2
TsaE
Glyco_tranf_2_5
AAA_24
Mg_chelatase
nSTAND3
AAA_assoc_2
PIF1
SKI
Herpes_Helicase
AAA_28
Motif
Other DBs
NCBI-ProteinID:
QBI02874
LinkDB
All DBs
Position
complement(4824481..4826781)
Genome browser
AA seq
766 aa
AA seq
DB search
MSYQVLARKYRPRNFETLVGQEHVVRALTHALGTGRLHHAYLFTGTRGVGKTTLSRILAK
SLNCTGPDGNGGITATPCGACEACRAIDGGRFVDYIEMDAASNRGVDEMAQLLEQAVYAP
SNARFKVYMIDEVHMLTNHAFNAMLKTLEEPPEHVKFILATTDPQKIPVTVLSRCLQFNL
KQMPPGHIVGHLENILGQEGVSFEQPALRLLAQGAHGSMRDALSLTDQAIAYAAGAVTLE
AVQGMLGALDQSYLVRLLDALASRDGADLMAVADEMASRSLSYNGALQDLGTLLHRIALA
QTVPAAVPEDLPEYADIIRLAAEFDAEEVQLYYQIAVHGRNELGLAPDEYAGFSMTLLRM
LAFRPGVGGAEAAPGGAPANTPVMSRPAPGSSPARAAAAAAAPAVASAATQAPRAAGPAA
SPTAASHAAAPQPSVAPQPAAAPRAAVFTPPPAPAPAAPAAATRPSGPVSPARAAINAAL
EAARAATMARTGARPPMRPTAPEEPAQQAPAMQAPAPQAAAPAKPLPWEEARPQGDAAVL
EAPPAVQARPAPPEEDDLPPWVTEFSDDSAVAAPSQRAPSRAEAPAQQRADVRAEAPAQH
RAEAPAPAAPVAAARQPAPAQAPYAYVITPVPELEWDGNWPLLAAHLPLRGVAQQLATQA
ELIQCTIDGNAVVFRLRCPIDTWRTPPNVEKLTAALAERFNRPARVETELGPVWYTTAAE
QQAHREACQRQAEDMVHNDAFVQAMVREFGAFVVPGSIVAPITPAH
NT seq
2301 nt
NT seq
+upstream
nt +downstream
nt
atgtcctatcaagtcctcgctcgcaagtaccgtccccgcaactttgaaacgctcgtcggc
caggagcacgtcgtgcgtgcgctgacgcatgcgctgggcacgggccggctgcaccatgcc
tacctgttcaccggcacgcgcggcgtcggcaagaccacgctgtcccgcatcctggcgaaa
tcgctgaactgcaccgggccggacggcaatggcggcatcaccgccacgccatgcggcgcc
tgcgaggcatgccgcgccatcgatggcgggcgcttcgtcgactatatagagatggatgcc
gcgtcgaaccgcggcgtggacgagatggcgcagctgctcgagcaggccgtctacgcgccc
agcaatgcacgcttcaaggtctacatgatcgacgaggtgcacatgctgaccaaccacgcg
ttcaatgccatgctgaaaacgctggaagaaccgcccgagcacgtgaagttcatcctggcg
accaccgatccgcaaaagatccccgtcaccgtcctgtcgcgctgcctgcagttcaacctg
aagcagatgccgcccgggcacatcgtcggccacctggaaaacattcttggccaggaaggc
gtgtcgttcgaacagccggccctgcgcctgctggcgcagggcgcgcatggctcgatgcgc
gatgcgctgtcgctgaccgaccaggcgatcgcctacgccgctggcgccgtcacgctggaa
gcggtgcagggcatgctgggcgcgctggaccagtcgtacctggtgcgcctgctcgacgcg
ctggccagccgagatggtgccgacctgatggcggtcgccgacgagatggccagccgcagc
ctgtcgtacaacggcgcgctgcaagaccttggcacgctgctgcaccgcatcgcgctggcg
cagacggtgccggcggccgtgccggaggacttgccggaatacgcggacatcatccgcctt
gccgccgagttcgatgcggaagaggtgcagctgtattaccagatcgccgtccatggccgc
aacgagctgggcctggcgccggacgaatatgccggtttctcgatgacgctgctgcgcatg
ctggcctttcgccccggcgtcggtggcgccgaagccgcacctggcggcgccccggccaac
acgccggtgatgtcgcgcccggcgccgggcagttcgccggcccgcgcggccgccgccgcg
gcggcaccggcagtggcatcggccgccacgcaggcgccacgcgccgccggacccgcggcc
agcccgaccgctgccagccatgccgccgcgccgcagccctccgttgcgccacaacctgcc
gcggcaccacgcgccgccgtcttcacgccgccgcccgctccggcaccggcagcacccgcc
gcggcaacccgcccatccggccccgtgagcccggcacgcgccgctatcaacgcggcgctg
gaggcggcccgcgcggcgacgatggcacgcaccggcgcccgtccgccgatgcgcccgacc
gctccggaagagccggcgcaacaggcgcctgcgatgcaggcgccggcaccgcaggctgcc
gcgccggccaagccattgccgtgggaagaggcgcggccgcagggcgatgccgcggtgctc
gaagcgccgcccgccgtgcaggcccgcccggcgccgccggaagaggacgacctgccgcca
tgggtcaccgaattctcggatgacagcgcggtggccgcgccgtcgcagcgcgcgccgagc
cgggccgaagccccggcacagcagcgtgccgatgtccgcgccgaagcgcctgcccagcat
cgcgccgaagcacccgcgccagcggcgccagtggcagcggcgcggcagccggcccccgcc
caggcgccctatgcctacgtgatcacgccggtccccgaactggaatgggacggcaactgg
ccgctgctggcggcgcacctgccgctgcggggcgtggcgcagcaactggccacgcaggcc
gaactcatccaatgcacgatcgacggcaatgccgtcgtattccgcctgcgctgcccgatc
gacacctggcgcacgccgccgaacgtggagaagctgacggcggcgctggccgagcgcttc
aaccgccccgcgcgggtggaaacggaactgggcccggtgtggtacaccaccgccgccgag
cagcaggcgcaccgcgaagcatgccagcgccaggccgaagacatggtgcacaacgacgcg
ttcgtgcaggcgatggtgcgcgagttcggcgccttcgtcgtgcccggctcgatcgtggcc
cccatcacaccggctcactga
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