Pseudoduganella albidiflava: EYF70_20100
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Entry
EYF70_20100 CDS
T05903
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
mali
Pseudoduganella albidiflava
Pathway
mali00260
Glycine, serine and threonine metabolism
mali00460
Cyanoamino acid metabolism
mali00630
Glyoxylate and dicarboxylate metabolism
mali00670
One carbon pool by folate
mali00680
Methane metabolism
mali01100
Metabolic pathways
mali01110
Biosynthesis of secondary metabolites
mali01120
Microbial metabolism in diverse environments
mali01200
Carbon metabolism
mali01230
Biosynthesis of amino acids
mali01240
Biosynthesis of cofactors
mali04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
mali00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
EYF70_20100
09102 Energy metabolism
00680 Methane metabolism
EYF70_20100
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
EYF70_20100
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
EYF70_20100
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
EYF70_20100
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
EYF70_20100
Enzymes [BR:
mali01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
EYF70_20100
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Aminotran_5
Met_gamma_lyase
Motif
Other DBs
NCBI-ProteinID:
QBI02893
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Position
complement(4850861..4852105)
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AA seq
414 aa
AA seq
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MFAKDHTLAAIDPELFGAIQNENKRQHDHIELIASENYTSPAVMEAQGSQLTNKYAEGYP
GKRYYGGCEYVDVVEQLAIDRVKQLFGAEAANVQPNSGSQANQGVFFAVLKPGDTIMGMS
LAEGGHLTHGMGLNMSGKWFNVVSYGLTAEEDIDYAAMEKLAHEHKPKLIIAGASAFSKK
IDFERFAAVAKAVGAYFMVDMAHYAGLIAAGLYPNPVPHADFVTSTTHKSLRGPRGGIIL
MKAEHEKIINSAIFPGIQGGPLMHVIAGKAVAFKEAQSEEFKAYQQQVVKNADVLAKTLI
KRGLRIVSGGTESHVFLVDLRAKNLTGKEAEAILGSAHITCNKNGIPNDPQKPFVTSGIR
LGSPAMTTRGFKEAEAEEVGNLIADVLDNPQDAATIERVKAAVKVLADKYPVYA
NT seq
1245 nt
NT seq
+upstream
nt +downstream
nt
atgttcgcaaaagatcacaccctcgccgccatcgacccggaactgttcggcgccatccag
aacgagaacaagcgccagcacgaccacatcgaactgatcgcatcggagaactacacgtcg
ccggcggtaatggaagcgcagggctcgcagctgacgaacaagtatgcggaaggctacccg
ggcaagcgctactacggcggctgcgaatacgtcgacgtcgtagagcaactggcgatcgac
cgcgtgaagcagctgttcggcgccgaagcggccaacgtgcagccgaattccggctcgcag
gcgaaccagggcgtgttcttcgccgtgctgaagccgggcgacacgatcatgggcatgtcg
ctggccgaaggcggccacctgacgcacggcatgggcctgaacatgtccggcaaatggttc
aacgtggtgtcgtacggcctgaccgccgaggaagacatcgactacgcggccatggaaaag
ctggcccacgagcacaagcctaagctgatcatcgccggcgcctcggccttctcgaagaag
atcgacttcgaacgcttcgccgccgtggccaaggcggtcggtgcctacttcatggtggac
atggcccactacgccggcctgatcgccgccggcctgtacccgaacccggtgccgcacgcc
gacttcgtcacgtccaccacgcacaagtcgctgcgcggcccgcgcggcggcatcatcctg
atgaaggccgaacacgagaagatcatcaactcggcgatcttccccggcatccagggcggc
ccgctgatgcacgtcatcgccggcaaggccgtggccttcaaggaagcccagtccgaagaa
ttcaaggcctaccagcagcaagtggtgaagaacgccgacgtgctggcgaaaacgctgatc
aagcgcggcctgcgcatcgtttccggcggtaccgagtcgcacgtgttcctggtggacctg
cgcgccaagaacctgaccggcaaggaagccgaggcgatcctgggttcggcccacatcacc
tgcaacaagaacggcatcccgaacgacccgcaaaagccgtttgtcacgtccggcatccgc
ctgggcagcccggccatgaccacgcgcggcttcaaggaagcggaagcggaagaagtgggc
aacctgatcgccgacgtgctggacaatccgcaggatgccgccacgatcgagcgcgtgaaa
gccgccgtgaaagtgctggctgacaagtacccggtttacgcgtaa
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