Pseudoduganella albidiflava: EYF70_20620
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Entry
EYF70_20620 CDS
T05903
Symbol
prpR
Name
(GenBank) propionate catabolism operon regulatory protein PrpR
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
mali
Pseudoduganella albidiflava
Brite
KEGG Orthology (KO) [BR:
mali00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mali03000
]
EYF70_20620 (prpR)
Transcription factors [BR:
mali03000
]
Prokaryotic type
Helix-turn-helix
Other families
EYF70_20620 (prpR)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
NACHT
AAA_2
HTH_psq
HTH_17
AAA
HTH_23
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
QBI02978
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Position
4979657..4981270
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AA seq
537 aa
AA seq
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MTDLLHGDPDKPVIWTVSMSRLSDLFRDITPEYDALATIEPIHLGFDEAVRHIRERLATE
RCDAVISAGSNAAYLKGRLPVPLVVAKASGTDMMRALARARRVSERIAVVTYQQPMPELA
EFAATFGFDVVQRTYVTREDALAQVHELKAAGIRAIVGAGLITDLAEDAGMTGVFLYSAA
SIRQAFDDALEMARLAQLETGWMGRRRGRGGAVQDPPRARHGLADLRGESPAMEQVRQMV
VLYARSAATVLIQGETGSGKELAAQAIHRAAPHGRVDEARRPFLAVNCGAIAESLLEAEL
FGHEEGAFTGARRGGRAGLFEAANGGTLFLDEIGEMPLALQTRLLRVLEEREVVRVGGTR
PVPVDVRIISATHCDLAQRVRDGRFRADLFYRLAVLRLALPPLRERTADIVPLAEWLLRN
ALASLGARAQPNLQAELQACAPLLAGHAWPGNVRELRNLCERLALFLAAEPLQALTPAFV
LAVGPELAAGAGVAAPPAAERVTDVLRRFDGRRDAAAAYLGISRTTLWRRLREEGGG
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatctcctccacggcgacccggacaaacccgtcatctggacggtgtccatgtcg
cgcctgtccgacctgttccgcgacatcacgcccgagtacgatgcgctggccaccatcgaa
ccgatccacctcggcttcgacgaggcggtgcgccatatccgcgagcggctggccacggag
cgttgcgatgccgtcatctccgccgggtcgaacgcggcttacctgaagggacgcctgccg
gtcccgctggtggtggccaaggccagcggcacggacatgatgcgcgcgctggcgcgggcg
cgccgggtatcggagcggatcgccgtggtcacctaccagcagccaatgccggaactggcc
gagttcgcggccacgttcggcttcgacgtggtgcagcgcacctatgtcacgcgggaagat
gcgctggcccaggtgcatgaactgaaggcggccgggatccgcgccatcgtcggcgccggc
ctgatcaccgacctggccgaggacgccggcatgaccggcgtgttcctctactcggcggcc
tcgatccggcaagccttcgacgatgcgctggaaatggcccggctggcgcagctggaaacg
ggatggatgggccggcgccgcggccgcggtggcgccgtgcaggacccgccgcgcgcccgg
cacggcctggccgacctgcgcggcgaatcgccggcaatggaacaggtgcggcagatggtg
gtgctgtatgcgcgttcggccgccacggtgctgatccagggcgagaccggcagcggcaag
gaactggcggcgcaggcgatccaccgcgccgcgccgcacggcagggtcgacgaggcgcgc
cgcccgttcctggcggtgaattgcggcgccattgccgaatcgctgctggaagcggaactg
ttcggccacgaggaaggcgcgtttaccggcgcgcggcgcggcggccgcgccggcctgttc
gaggcggccaacggcggcacgctgttcctcgacgagatcggcgagatgccgctggcgctg
caaacgcggttgctgcgagtgctggaagagcgggaggtggtgcgggtgggcggcacgcgg
ccggtacccgtggacgtacggatcatcagtgccacgcactgcgacctggcgcagcgggtg
cgcgacggacgcttccgtgccgacctgttctaccggctcgcggtgctgcggctggcattg
ccgccgctgcgcgagcgcaccgccgacatcgtgccgctggccgaatggctgctgcgcaat
gcgctggcctcgctgggtgcgcgcgcccagcccaacctgcaggccgagctgcaggcctgc
gcgccgctgctggccggacatgcctggcccggcaatgtgcgcgagctgcgcaacctgtgc
gaacggctcgcgctgttcctggccgccgaaccgctgcaggcgctgacgcccgcgttcgtg
ctcgccgtggggcccgagctggcggccggcgcgggcgtcgccgcgccgcccgccgcggaa
cgcgtcaccgacgtgctgcgccgtttcgatggccggcgcgatgccgccgcggcctacctc
ggcatcagccgcaccacgctgtggcgccggctgcgcgaggaagggggcggctga
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