Pseudoduganella albidiflava: EYF70_23820
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Entry
EYF70_23820 CDS
T05903
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
mali
Pseudoduganella albidiflava
Brite
KEGG Orthology (KO) [BR:
mali00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mali03021
]
EYF70_23820 (rpoH)
Transcription machinery [BR:
mali03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EYF70_23820 (rpoH)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
UCR_14kD
Motif
Other DBs
NCBI-ProteinID:
QBI03513
UniProt:
A0A411X3Q2
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All DBs
Position
5751540..5752439
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AA seq
299 aa
AA seq
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MTTMSAPSALVPAGSSALGLGFSGNLGNLDAYISAVNRLPMLTHEEEVSLGRRLKENNDL
KAAEKLVLSHLRLVVSIARGYLGYGLPHADLIQEGNIGLMKAVKRFDPDQNVRLVSYAMH
WIKAEMHEYILKNWRLVKVATTKAQRKLFFNLRSHKTGLDAMTPDQIDALAKTLDVKREE
VIEMETRLSGRDIALEAPTDDEDDKFSPIAYLSSDLSEPTKVLEAEQVTRLQSEGLETAL
GKLDPRSRRIVEARWLANDDGSGATLHTLADEFGVSAERIRQIESAALKKMKGALAAYV
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgactaccatgtccgcaccttccgccctggttccagccggcagtagtgcactgggactc
gggttcagtggcaacctggggaacctggatgcctacatttccgctgtaaaccgcctgccg
atgctgacgcacgaggaagaagtctcgctgggccgccgcctgaaggaaaacaatgacctg
aaggcagcggaaaagctcgtgctgtcgcacctgcgcctggtggtatcgatcgcccgcggc
tacctcggctatggcttgccgcacgccgacctgatccaggaaggcaatatcggcctgatg
aaggccgtgaagcgcttcgacccggaccagaacgtgcgcctcgtgtcgtacgccatgcac
tggatcaaggccgagatgcacgagtacatcctgaagaactggcgcctggtgaaagtggcc
acgacgaaggcacagcgcaagctgttcttcaacctgcgcagccacaagaccggcctggac
gcgatgacgccggaccagatcgatgcgctggccaaaacgctggacgtcaagcgcgaggaa
gtgatcgagatggaaacgcgcctgtccggccgcgatatcgcgctggaagcaccgaccgac
gatgaagacgacaagttctcgccgatcgcctacctgtcgtccgacctgtcggagccgacc
aaggtgctcgaagcggaacaggtgacgcgcctgcagtcggaaggcctggaaacggccctg
ggcaaactcgatccgcgctcgcgccgcatcgtcgaagcgcgctggctggccaacgacgac
ggctccggcgccacgctgcacacgctggccgacgaattcggcgtctccgccgagcgcatc
cgccagatcgaatcggccgcgctgaagaagatgaaaggcgcgctggccgcctacgtgtaa
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