Pseudoduganella albidiflava: EYF70_24400
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Entry
EYF70_24400 CDS
T05903
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
mali
Pseudoduganella albidiflava
Pathway
mali03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mali00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EYF70_24400 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mali03400
]
EYF70_24400 (ruvB)
Enzymes [BR:
mali01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EYF70_24400 (ruvB)
DNA repair and recombination proteins [BR:
mali03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EYF70_24400 (ruvB)
RecFOR pathway proteins
EYF70_24400 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
AAA_22
AAA_16
AAA_3
TIP49
AAA_14
Rad17
AAA_18
nSTAND3
RNA_helicase
AAA_17
ABC_tran
AAA_28
NTPase_1
TsaE
AAA_24
Sigma54_activ_2
PEPCK_ATP
Motif
Other DBs
NCBI-ProteinID:
QBI03619
LinkDB
All DBs
Position
complement(5871672..5872721)
Genome browser
AA seq
349 aa
AA seq
DB search
MAIQTDSFTEQRIIDAAPSSPNEEAIERALRPKLLDEYVGQQKIRNQLEIFISAARGRSE
ALDHTLLFGPPGLGKTTLANIIAREMGVNLRQTSGPVLERPGDLAALLTNLEANDVLFID
EIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSVKLDLQPFTLVGATTRAGMLTNPLRD
RFGIVARLEFYTTEELAKIVTRSAALLKANIDDTGALEIARRARGTPRIANRLLRRVRDY
AEVKSNGDITKDVADAALVMLDVDTVGFDVMDRKLLEAVLFKFNGGPVGIGNLAAAIGEA
ADTIEDVLEPYLIQQGYLQRTPRGRVATPAAFEHFGLKPPRTSLTGELW
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggccatccagaccgatagttttactgaacagcgcatcatcgatgccgccccctcgtcg
ccgaacgaggaagcgatcgaacgcgcgctgcgccccaagctgctcgacgaatatgtcggc
cagcaaaagatccgcaatcagctcgagatcttcatttccgcggcgcgcgggcgcagcgag
gcgctcgaccacacgctgctgttcggcccgccgggcctgggcaagaccacgctggccaac
atcatcgctcgcgagatgggcgtcaacctgcgccagacatccggccccgtgctggagcgc
ccgggcgacctggccgcgctgctgaccaatctcgaagcgaacgacgtgctgttcatcgac
gagatccaccgcctgtcgccggtcgtcgaggaaatcctgtatccggcgctggaggactac
cagatcgacatcatgatcggcgaaggcccggccgcccgttcggtcaagctggacctgcag
ccgttcacgctggtcggcgccaccacgcgcgccggcatgctgaccaatccgctgcgcgac
cgcttcggcatcgtcgcccgcctggagttctataccaccgaggaactggcgaagatcgtc
acgcgcagcgccgcgctgctgaaggcgaacatcgacgacaccggcgcgctggagatcgcc
cgccgcgcgcgcggcacgccccgcatcgccaaccgcctgctgcgccgcgtgcgcgattac
gccgaggtgaaaagcaatggcgacatcaccaaggatgttgccgatgccgcgctggtcatg
ctcgacgtcgataccgtcggcttcgacgtgatggaccgcaagctgctcgaagcggtgctg
ttcaagttcaacggcgggccggtcggcatcggcaacctggccgccgccatcggcgaggcc
gccgacacgatcgaggatgtgctggaaccttacctgatccagcaaggctacctgcagcgc
acgccgcgcggccgcgttgccacgcctgccgcgtttgaacacttcggcctgaagccgccg
cgcaccagcctcaccggcgaactgtggtga
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