Pseudoduganella albidiflava: EYF70_24690
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Entry
EYF70_24690 CDS
T05903
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
mali
Pseudoduganella albidiflava
Pathway
mali00550
Peptidoglycan biosynthesis
mali01100
Metabolic pathways
mali01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
mali00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EYF70_24690 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
EYF70_24690 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mali01011
]
EYF70_24690 (mrdA)
Enzymes [BR:
mali01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
EYF70_24690 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
mali01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
EYF70_24690 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
QBI03671
LinkDB
All DBs
Position
complement(5935650..5937911)
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AA seq
753 aa
AA seq
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MTELKNNERELHLFRVRLTLLGTLVFICFALLLARLVWLQVIRHSDYMAQAEDNRIAVVP
IQPNRGLILDRNGVVLARNYSAYTLEITPSKLRVPLEEMIDALALIVEVTPKDRRRFKKL
MDESKNFASVPLRTRLSDEEVARFTANRFRYPGVEVQARLFRNYPLGETASHVIGYIGRI
NQKEAKAIEEREDAANYNGTDYIGKEGLEKSYEKHLHGITGYEEVEVSAGGRAIRTLSRT
PPTSGSNLILSIDIELQKIAEEAFGEWRGALVAIEPSTGDVLAYVSRPGYDPNLFVDGID
SQSWNELNTSLDRPMVNRPLSGTYAPGSTFKPFMALAALETGKRTPSQAIFDPGFMYLGT
HKFRDDVVNGHGTVDLRKSIVVSCNTYYYHLGRDMGIDMIHDFMKPFGFGQKTGIDLDNE
KTGVLPSKEWKQSRYKKNPRAGKWVGGDTISVSNGSGYNSYTPLQIAHAVANLANNGIVM
KPHLVKIIEDGGTRARTLTVPKESYRIPLKQQNIDLIKDAMVGVVSEQGGTATRAFAGVQ
YTVGGKTGTAQVVGIRKNEKYNAKTLAERLRDNALFTAFAPADKPRIVIAMVVENAGFGG
AVAAPIARKVLDYYMLGKRPTEKNTDKVPKEDAEVFEPIEGPLAEEEAALAREQLAAQQA
QAGQGAQPGAPAAAGQGAVKPAPRAPAGAAQNPPPGPGLMPVRPPTTTAPASGAPPAPAG
RPAAQAPAQGTAPPRPAEGRAQQPAAIPPRNRE
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagctgaagaacaacgagcgcgaactgcacctgttccgggtgcggctgacgctg
ctcggcaccctcgtcttcatctgcttcgcgctgctgctcgcgcgcctggtctggctgcag
gtgatccgccacagcgactacatggcgcaggccgaggacaaccggatcgccgtggtgccg
atccagccgaaccggggcctgatcctggaccgcaacggcgtggtcctggcgcgcaactac
tcggcctacacgctcgagatcacgccgtccaagctgcgcgtgccgctggaggaaatgatc
gatgcgctggccctgattgtcgaggtgacgccgaaggaccgccgccgcttcaagaagctg
atggacgagtcgaagaacttcgccagcgttccgctgcgcacccggctgtccgacgaggag
gtggcgcgctttaccgcgaaccggttccgctaccccggcgtggaagtgcaggcgcgcctg
ttccgcaactatccgctgggcgagacggcgtcgcacgtgatcggctacatcggccgcatc
aaccagaaggaagccaaggcgatcgaggagcgcgaggatgccgcgaactacaacggcacc
gactacatcggcaaggaaggcctggaaaagagctatgaaaagcacttgcacggcattacc
ggctacgaggaagtcgaagtgtcggcgggcgggcgcgcgatccgcacgctgtcgcgcacg
ccgcccacctccggcagcaacctgatcctgtcgatcgatatcgaactgcagaagatcgcc
gaggaagcgttcggcgaatggcgcggcgcgctggtggcgatcgagccgtcgaccggcgac
gtgctggcttatgtgtcccggccgggctacgacccgaacctgttcgtggatggtatcgat
tcgcagagctggaacgaactgaatacgtcgctggaccggccgatggtgaaccggccgctg
tccggcacctatgcgcccggctcgacgttcaagccgttcatggcgctggccgcgctggag
acgggcaagcgcacgccgtcgcaggccatcttcgacccgggcttcatgtacctcggcacc
cacaagttccgcgacgacgtggtgaatggccacggcacggtggacttgcgcaagtcgatc
gtggtgtcgtgcaacacgtactactaccacctgggccgcgacatggggatcgacatgatc
cacgacttcatgaagccgttcggcttcggccagaagaccggcatcgacctggacaacgag
aagaccggcgtgctgccatcgaaggaatggaagcagtcgcgctacaagaagaacccgcgg
gccggcaagtgggtgggcggcgacacgatctcggtgtcgaacggttccggctacaactct
tatacgccgctgcagatcgcccacgcggtggcgaacctggccaacaacggcatcgtgatg
aagccgcacctggtgaagatcatcgaggatggcggcacgcgcgcccgcacgctgaccgtg
ccgaaggaaagctaccgcattccgctgaagcagcagaacatcgacctgatcaaggacgcc
atggtcggcgtggtgagcgagcagggcggcacggcgacgcgcgccttcgccggggtgcaa
tacacggtgggtggcaagacgggtaccgcgcaggtcgtgggcatccgcaagaacgagaag
tacaacgccaagacgctggccgagcggctgcgcgacaatgcgctgttcaccgccttcgct
ccggccgacaagccgcgcatcgtgatcgccatggtggtcgagaatgccggcttcggcggc
gccgtggccgcgccgatcgcccgcaaggtgctcgactactacatgctgggcaagcggccg
accgagaagaacaccgacaaggtgccgaaggaagacgccgaagtgttcgagcccatcgaa
ggcccgcttgccgaggaagaagcggcgctggcgcgcgaacagctggcggcgcagcaggcg
caggccgggcagggcgcacagccgggggcgccggcggcagcggggcagggcgcggtgaag
ccggcgccgcgggctcctgcgggggcggcacagaatccgccgcccggaccgggactgatg
ccggtgcgtccgccgaccactacggcgccggcatccggtgcgccacccgcaccggcgggg
cggccagcggcgcaggcgcccgcgcaagggacagcgccgccgcgccccgcggaagggcgg
gcgcaacagcctgccgccatcccgccaaggaacagggaataa
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