Pseudoduganella albidiflava: EYF70_26615
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Entry
EYF70_26615 CDS
T05903
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mali
Pseudoduganella albidiflava
Pathway
mali00300
Lysine biosynthesis
mali00470
D-Amino acid metabolism
mali01100
Metabolic pathways
mali01110
Biosynthesis of secondary metabolites
mali01120
Microbial metabolism in diverse environments
mali01230
Biosynthesis of amino acids
Module
mali_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mali00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EYF70_26615 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EYF70_26615 (lysA)
Enzymes [BR:
mali01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
EYF70_26615 (lysA)
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Gene cluster
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QBI03987
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Position
6432155..6433432
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AA seq
425 aa
AA seq
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MSHFDYQNGVLHAEGVSLPAIAEQFGTPTYVYSRAQLLDNFDAYANACAGRDALICYAMK
ANSNLAILDLLARRGAGFDIVSGGELLRVIAAGGDPKKVIFSGVGKSEAEMRLALGHDIL
CFNVESIPELHRLNAVAGALGKKARISLRVNPNVDPKTHPYIATGLKASKFGVAFDDALA
TYRTAAQLPNLEPVGIDCHIGSQLLDDTPLLEALDRLIELIDALAAEGIHLHHVDLGGGL
GIDYGVAGEEQPAPAGDYVNRVFQRVDAWRAEKHGGRGIKVIFEPGRSIVGNTGVLLTKV
EFIKHGEEKNFCIVDAAMNDMARPALYQAWMDMQPVVKRETAGAVFDVVGPICESGDWLA
RDRELPVEAGDLLVMKTAGAYGMTMASNYNTRGRAAEVMVDGGQVHLVRRRETPEELFAL
ESVIR
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgtcccacttcgactatcagaacggcgtgctgcacgccgaaggcgtttccctgcccgcc
attgcagagcaattcggtacgccgacctatgtgtactccagggcccagctgctggacaac
ttcgatgcctatgcaaatgcctgcgccggccgcgatgccctcatctgctatgcgatgaag
gccaattcgaacctggcgatcctggacctgctggcgcgccgcggtgccggcttcgacatc
gtgtcgggcggcgaactgctgcgcgtgatcgccgccggcggcgatccgaagaaagtgatt
ttctcgggcgtgggcaagagcgaggcggagatgcgcctggcgctcggccatgacatcctg
tgcttcaacgtggagtcgatccccgagctgcaccgcctgaacgccgtggccggcgcgctg
ggcaagaaggcgcgcatctcgctgcgcgtgaatccgaacgtggatccgaagacgcacccg
tacatcgccaccggcctgaaggccagcaagttcggcgtggccttcgacgatgcgctggcc
acctaccgtaccgccgcgcaattgccgaacctggagccggtcggcatcgactgccacatc
ggctcgcagctgctggacgacacgccgctgctggaagcgctggaccgcctgatcgagctg
atcgacgccctggcggccgaaggcatccacctgcaccacgtggacctcggcggcggcctg
ggcatcgactacggcgtggccggcgaagagcagcccgcgccggctggcgattacgtgaac
cgcgtattccagcgggtcgatgcgtggcgtgcggaaaagcacggcggccgcggcatcaag
gttatcttcgagccgggccgttcgatcgtcggcaataccggcgtgctgctgacgaaggtg
gaattcatcaagcacggcgaagagaagaacttctgcatcgtcgacgcggcgatgaacgac
atggcccgccctgccctgtaccaggcgtggatggacatgcagcccgtggtcaaacgtgaa
acggccggcgccgtgttcgacgtggtcggcccgatctgcgaatccggcgactggctggcg
cgcgaccgcgaactgcctgtcgaggctggcgacctgctggtcatgaagacggccggcgcg
tatggcatgacgatggcgtccaactacaacacccgcggccgcgccgccgaggtgatggtc
gacggcggccaggtgcacctggtgcgccggcgcgagacgccggaagagctgttcgcgctg
gagtcggtgatccgctga
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