Pseudoduganella albidiflava: EYF70_26705
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Entry
EYF70_26705 CDS
T05903
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
mali
Pseudoduganella albidiflava
Pathway
mali03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
mali00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
EYF70_26705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mali03021
]
EYF70_26705
03400 DNA repair and recombination proteins [BR:
mali03400
]
EYF70_26705
Enzymes [BR:
mali01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
EYF70_26705
Transcription machinery [BR:
mali03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
EYF70_26705
DNA repair and recombination proteins [BR:
mali03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
EYF70_26705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
DUF7219
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
QBI04002
LinkDB
All DBs
Position
complement(6455183..6456160)
Genome browser
AA seq
325 aa
AA seq
DB search
MQNSLLKPRIIDVEALGAGHAKVVMEPFERGYGHTLGNALRRVLLSSMIGYAPTEVTIAG
VVHEYSSLDGVQEDVVDLLLNLKGVVFKVHNRDSVTLTLKKEGEGAVLASDIDLPHDVEL
INPDHVIAHLTAGGKLDMQIKVEKGRGYVPGNVRRLSEDTNKTIGRIILDASFSPVRRVS
YAVESARVEQRTDLDKLIINIETNGVITPEEAIRQSARVLVDQLNVFAALEGTEATAEAP
SRAPLVDPILLRPVDDLELTVRSANCLKAENIYYIGDLIQRSENELLKTPNLGRKSLNEI
KEVLASRGLTLGMKLENWPPAGLEK
NT seq
978 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaacagtttgttgaagccacgtatcatcgacgtcgaagcgctgggcgccggtcac
gcaaaagtcgtgatggagccattcgagcgcggctacggccacacgctgggcaacgccctg
cgtcgcgtgctgctgtcgtcgatgatcggctacgcgccgaccgaagtcaccatcgccggc
gtcgtgcacgagtactcgtcgctggatggcgtgcaggaagacgtggtcgacctgctgctg
aacctgaagggcgtggtcttcaaggtccacaaccgcgattccgtcacgctgaccctgaag
aaggaaggcgaaggcgccgtgctggcctcggatatcgacctgccgcacgacgtggaactg
atcaacccggatcacgtgatcgctcacctgaccgccggtggcaagctggacatgcagatc
aaggtcgaaaaaggccgtggctatgtgccgggtaacgtgcgccgcctgtcggaagacacc
aacaagacgatcggccgcatcatcctggacgcttcgttctcgccggtgcgccgcgtgtcg
tatgccgtggaatcggcccgtgtcgagcagcgtaccgacctggacaagctgatcatcaac
atcgaaaccaacggcgtgatcacgccggaagaagcgatccgccagtcggcacgcgtgctg
gtcgaccagctgaacgtgttcgccgcgctggaaggcacggaagccaccgccgaagcaccg
tcgcgtgctccgctggtcgatccgatcctgctgcgtccggtcgacgacctggaactgacc
gtccgttcggcgaactgcctgaaggccgagaacatctactacatcggcgacctgatccag
cgttcggaaaacgaactgctgaagacgccgaacctgggccgcaagtcgctgaacgagatc
aaggaagtgctggcatcgcgcggcctgaccctcggcatgaagctggaaaactggccgcca
gcaggcctggagaagtaa
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