Pseudoduganella albidiflava: EYF70_28310
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Entry
EYF70_28310 CDS
T05903
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mali
Pseudoduganella albidiflava
Pathway
mali00061
Fatty acid biosynthesis
mali00071
Fatty acid degradation
mali01100
Metabolic pathways
mali01212
Fatty acid metabolism
mali02024
Quorum sensing
mali04146
Peroxisome
Module
mali_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mali00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
EYF70_28310
00071 Fatty acid degradation
EYF70_28310
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
EYF70_28310
09145 Cellular community - prokaryotes
02024 Quorum sensing
EYF70_28310
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mali01004
]
EYF70_28310
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mali04147
]
EYF70_28310
Enzymes [BR:
mali01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
EYF70_28310
Lipid biosynthesis proteins [BR:
mali01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
EYF70_28310
Exosome [BR:
mali04147
]
Exosomal proteins
Exosomal proteins of breast milk
EYF70_28310
Exosomal proteins of breast cancer cells
EYF70_28310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
Motif
Other DBs
NCBI-ProteinID:
QBI04283
LinkDB
All DBs
Position
6821484..6823430
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AA seq
648 aa
AA seq
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MDAIPETFPRLLLEHGRTRPHKCAYREKYLGIWQAWTWAQAGDEVRALACGLAALGFTRG
MNLAIIGDNRPRLYWAMLAAQCLGGVAVPLYQDAPAADMAYVLDNAEIRYAIVEDQEQVD
KLFELKAEYGGIEHIAYDDERGMRHYRQRELVSFARLQEAGRAWDQANPGGFDAAVEAGR
GSDNAVILYTSGTTGKPKGVCQTHAALIAAGAGGTGFERLTDSENVLSYLPMAWVGDCLF
SFAQALVAGFTVNCPESAETVTIDLREIGPTYYFAPPRIFEGMLTQVMIRMEDAGTLKRR
MFHHFMEVARRVGADILDGRPVPAADRLRYALGDLLVYGPLKNVLGLSRVRVAYTAGAAI
GPDLFRFYRSIGINLKQFYGSTETCAYICLQPDGQIKFDSVGMAAPGVDVKLADNGEVLV
KSPTLMSCYFKRPDATMEAIDPQGWFHTGDAGIFDADGHLKIIDRAADVGRLNGGAIFAP
NYIENKLKFFPFIKEAVAFGHGRDTVCAFLNIDMDAVGNWAERRNIAYSGYADLAAHPQV
YALMTECVEKVNADLAADAAMSATQIHRFLVLHKELDPDDDELTRTRKVRRKFVAEKYRV
LIEALYGGRASQYIETQVKFEDGRSGIVAADLRIADSRVLPPDVRRAA
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atggacgcaataccggagacattcccccgcctgctgctggaacacgggcgaacccggccg
cacaagtgcgcctaccgggaaaagtacctgggcatctggcaggcctggacatgggcccag
gcgggcgacgaagtacgcgccctggcctgcggccttgccgcgcttggtttcacgcgcggc
atgaacctggccatcatcggcgacaaccggccgcgcctttactgggcgatgctggccgcg
caatgcctgggcggcgtagccgtgccgctgtaccaggatgcgccggcggcggacatggct
tacgtgctggacaacgccgagatccgctatgcgatcgtggaagaccaggaacaggtcgac
aagctgttcgagctgaaggccgaatacggcggcatcgagcacatcgcctacgacgacgag
cgcggcatgcgccactaccgccagcgcgagctggtgtccttcgcgcgcctgcaggaagcg
ggccgcgcgtgggaccaggccaacccgggcggtttcgatgccgccgtggaagcgggccgc
ggatcggacaacgcggtgatcctgtacacctccggcaccaccggcaagccgaagggcgtt
tgccagacgcatgcggcactgatcgccgccggcgccggcggcaccggtttcgaacggctg
accgacagtgaaaacgtgctgtcctacctgccgatggcgtgggtcggcgattgcctgttt
tcctttgcccaggcactcgtggcgggcttcaccgtgaattgcccggagtcggcggaaacg
gtgacgatcgacctgcgtgaaatcggccccacctattatttcgccccgccgcgcatcttc
gaaggcatgctgacgcaggtgatgatccgcatggaagatgcgggcacattgaaacgccgg
atgttccatcatttcatggaagtggcgcgccgcgtgggcgccgacatcctcgacggccgc
ccggtcccggcggcggaccggttgcgctacgcgctgggcgacctgctcgtgtacggcccg
ctgaaaaacgtgctgggcctgtccagggtgcgggtggcatatacggccggcgccgcgatc
ggccccgacctgttccgcttctaccgctcgatcggcatcaacctgaagcagttctacggc
tccaccgaaacctgcgcctacatctgcctgcagccggatggccagatcaagttcgacagc
gtcggcatggccgcgccgggcgtggacgtgaagctggccgacaatggcgaagtgctggtc
aagtcgcccacgctgatgagctgctacttcaagcggcccgatgccaccatggaggcgatc
gatccacaaggctggttccacaccggcgatgccggcatcttcgacgcggacggccacctg
aagatcatcgaccgcgcggcggacgtggggcgcctgaacggcggcgcgatcttcgccccg
aactatatcgagaacaagctgaagttcttcccgttcatcaaggaagcggtcgccttcggc
catgggcgcgataccgtatgcgccttcctcaatatcgacatggacgcggtgggcaactgg
gccgaacggcgcaacatcgcctactccggctatgccgacctggccgcccacccgcaggtg
tatgcgttgatgacggaatgcgtggaaaaggtcaacgccgacctggccgccgatgcggcc
atgagcgccacgcagatccaccgcttcctcgtgctgcacaaggagctcgacccggacgac
gatgaactgacccgcactcgcaaggtgcgccgcaagttcgtcgccgaaaaataccgcgtg
ctcatcgaggcgctgtatgggggccgcgcctcgcagtacattgaaacgcaggtgaagttc
gaggatggccgcagcggcatcgtggcggccgacctgcgcattgccgacagccgcgtgttg
ccgcccgatgtgcggcgcgcggcgtaa
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