Pseudoduganella albidiflava: EYF70_29620
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Entry
EYF70_29620 CDS
T05903
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K21405
sigma-54 dependent transcriptional regulator, acetoin dehydrogenase operon transcriptional activator AcoR
Organism
mali
Pseudoduganella albidiflava
Brite
KEGG Orthology (KO) [BR:
mali00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mali03000
]
EYF70_29620
Transcription factors [BR:
mali03000
]
Prokaryotic type
Helix-turn-helix
Other families
EYF70_29620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_5
HTH_30
AAA_2
HTH_23
HTH_Tnp_ISL3
Mg_chelatase
IclR_C
HTH_7
HTH_11
HTH_AraC
HTH_28
HTH_22
AAA_7
AAA
HTH_50
Motif
Other DBs
NCBI-ProteinID:
QBI04517
LinkDB
All DBs
Position
7112782..7114863
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AA seq
693 aa
AA seq
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MSDGALAHVRRVRSIVQGRDGSGAAGPCNAITRSWIRCLHDYQLDPERREEPEVVDAAEL
AERRERLAGVQAVAKVEMANLYQQLAGSGYAIVLTDAAGVLLNYFGDPGFTHAASRSGLM
PGAVWSERAQGTNGMGTCLAERRPVTVHQDEHYLVRHIGLSCAGAPIFDHEGEIVAALDA
SGESRLAQQHTLALVTMSVQMIENRVFLDRFRHDYILRFHNRPEFIGTLSEGAIALDPAG
KVLAATRCALFQLGFAAPADIVGHDITELFNSSFPGLVDSTVRKAFHAVPIFGLRNGARF
YSVMLPPVRVTSSAGRQAAAPTSQAPSPLERVHFGDAAMAANVRIATRVCERNVAIMLVG
ETGTGKEVFAQALHRSGPRAGKPFVAINCAAIPETLIESELFGYRAGAFTGASKEGQQGK
LYQANGGTLFLDEIGDMPYPLQARLLRVLEERTIVPLGGGAPLPLDIQVTSATHCDLQQM
IAKGTFREDLFYRLQGITLRLPPLRERTDVRALVSLIVTEESDDGAPLSLDETLLAALER
QRWPGNLRQLRHLLRAMIALRESDHLTVHDLPPEYRTGIVAPESPMRDSEEALSGTRDPG
AHAAGPLAAGLPQDDVLAADPDATDPLATDPDDGNSHDLNPLEHAEREALLRELQRHDWN
ISTVARQLHISRNTLYRKVQRLHIRHPGKAVPC
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatggtgccctggcccatgtccggcgggtgcgttcgatcgtccagggccgcgac
ggctccggggcggccggcccgtgcaacgccattacccgttcgtggatccgttgcctgcac
gattaccagctcgacccggagcggcgcgaagagccggaggtggtcgatgcggccgaactg
gccgagcggcgcgagcggctggcgggcgtgcaggccgtcgccaaggtcgagatggccaac
ctgtaccagcaactggccggttcgggctacgcgatcgtgctgaccgacgccgccggcgtg
ctgctcaattatttcggcgaccccggctttacccacgcggcatcccgttcgggcctgatg
ccgggcgccgtgtggagcgaacgggcgcaaggcaccaacggcatgggcacctgcctggcc
gagcgccgccccgtcaccgtgcaccaggacgagcattacctggtccgccacatcggactc
agctgtgccggcgcccccatcttcgaccatgaaggcgaaatcgtcgcggcgctggatgcg
tccggcgaatcgcgcctggcgcagcagcacacgctggcgctcgtcacgatgtccgtgcag
atgatcgagaaccgcgtcttcctcgaccgcttccggcacgactacatcctgcgcttccat
aaccggcccgaattcatcggcacgctgagcgagggggcgatcgcgctggaccccgccggc
aaggtgctggccgccacccgttgcgcgctgttccagctgggctttgcggcgccggcggac
atcgtcggccacgacatcacggaactgttcaacagctccttcccgggcctggtggacagt
acggtgcgcaaggcattccacgcggtgccgatcttcggcctgcgcaatggcgcccgcttc
tacagtgtgatgctgccgccggtgcgcgtgacgtcatccgccggcaggcaagccgccgcg
cccacgtcacaagcgccttcgccgctggagcgcgtgcatttcggcgacgcggccatggcc
gccaacgtgcgcatcgccacccgcgtgtgcgagcgcaacgtggcgatcatgctggtcggc
gaaaccggcacgggcaaggaagtcttcgcccaggcgctgcaccggtccggaccgcgcgcc
ggcaagccgttcgtggcgatcaactgcgcggccattccggaaacgctgatcgaaagcgaa
ctgttcggataccgggcgggcgccttcacgggtgccagcaaggaaggccagcaaggcaag
ctgtaccaggccaatggcggcacgctgttcctcgacgagatcggcgacatgccctatccc
ttgcaggcccggctgctgcgggtgctcgaagagcgcaccatcgtaccgctgggcggcggt
gccccgctgcccctggatatccaggtgaccagcgccacgcattgcgacctgcagcagatg
attgccaagggcacgttccgcgaagacctgttctaccgcctgcagggcatcacgctgcgg
ctgccgcccctgcgcgaacgcaccgacgtgcgcgccctcgtcagcctgatcgtcaccgag
gaaagcgatgacggcgcgccgctgtcgctcgacgaaaccctgctggccgcgctggaacgg
cagcgctggccgggcaaccttcgccagttgcggcacctgctgcgcgcgatgatcgcgctg
cgcgaatcggatcacctgacggtgcacgacctgccgccggagtaccgcaccggtattgtc
gcgccggaaagccccatgcgggatagcgaagaggccttgtcgggcacgcgcgatcccggc
gcgcacgccgctggcccgctggccgctggcctcccacaggacgatgtgctggctgccgat
ccggatgccaccgatccgctagccaccgatccggatgacgggaattcgcacgacttgaat
ccgctggaacatgccgaacgcgaggccttgctgcgcgagctgcagcggcacgactggaac
atttccacggtggcgcggcagctccatatcagccgcaacacgctgtatcgcaaggtgcag
cgcctgcatatccgtcatcccggcaaggccgtgccgtgctga
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