Microcella alkaliphila: MalAC0309_0608
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Entry
MalAC0309_0608 CDS
T05359
Symbol
topA
Name
(GenBank) DNA topoisomerase I A
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
malk
Microcella alkaliphila
Brite
KEGG Orthology (KO) [BR:
malk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
malk03032
]
MalAC0309_0608 (topA)
03400 DNA repair and recombination proteins [BR:
malk03400
]
MalAC0309_0608 (topA)
Enzymes [BR:
malk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
MalAC0309_0608 (topA)
DNA replication proteins [BR:
malk03032
]
Prokaryotic type
DNA Topoisomerases
MalAC0309_0608 (topA)
DNA repair and recombination proteins [BR:
malk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
MalAC0309_0608 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
HC2
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
BAU31479
UniProt:
A0A0U4WUC1
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All DBs
Position
622584..625394
Genome browser
AA seq
936 aa
AA seq
DB search
MPGTKKLVIVESPAKAKTIGRYLGDDYEVQASVGHVRDLMEPKNLPAELKKGPLGKFAID
VDNGFEPHYVVSDSKKRTVADLKKALKGADELWLATDEDREGEAIAWHLLEVLKPKVPVK
RMVFHEITKEAIQKAVDATRDLDTALVDAQETRRILDRLYGYEVSPVLWRRIGPGLSAGR
VQSAATRLIVDRERERIAFVSASYWDLDTTLTPAAENAPFAARLSRLGGSKVASGRDFDD
RGQLKAKDAVALDEATVTNLAEALRASDLQLTVTSVESKPYTRRPAAPFTTSTLQQEAGR
KLRFTARQTMSVAQSLYENGYITYMRTDSVTLSQQAVDAARSQARDLYGADFVPDKPRLY
SGKSKNAQEAHEAIRPAGDVFRTPSQLEGTLRGNDWKLYDLIWKRTVASQMADARGQTAS
IAMATGPLTSADARVSGQVAEFAASGTVITFRGFLAAYEEGRDEERNADPAEAKEATLPP
LTEGQALGVIDVEPKGHETSPPPRYTEASLVKALEERGIGRPSTYASIISTIIDRGYVAP
RGSALVPGWVAFSVVKLLEQHFGDLVEYDFTAEMEADLDRIARGEADRTDWLTAFYFGDD
RQPGLRPVVDNIGDIDARAINSIPIAEAITLRVGKYGPFLEVDEGGDTPRRVNIPQDMAP
DELTPTRAQELVDAPVVGDRELGINPATGKMVVAKDGRFGPYVTEVDPAPEPQADAATGE
VVDEAPAKAPARGKKAAAEKPRTASLFKDMSPDTIDLDTAIRLLDLPRTVGDDPESGDTI
TAQNGRYGPYLKKGADTRSLDSEAQIFEIDLAGALEKFAQPKYGARKASSALKEFDADPV
SGKPIKLKDGRFGPYVTDGETNATVPRGEDPMEIDFERAVQLIADKRAKGPAKKPAAKRG
TAAKKPAAKKTPARKPATKKPAATKTAAKKTPPAAE
NT seq
2811 nt
NT seq
+upstream
nt +downstream
nt
gtgcccggtacgaagaagcttgtcatcgtcgagtcgcccgccaaggcgaagacgatcggc
cgctacctcggcgacgactacgaggtgcaggcctccgtcgggcacgtgcgcgacctgatg
gagccgaagaacctgcccgccgaactgaagaaaggcccgctcggcaagttcgccatcgac
gtcgacaacggcttcgagccgcactacgtcgtctccgactcgaagaagcgcaccgtcgcc
gacctcaagaaggcgctgaagggtgctgacgagctctggctcgccactgatgaagaccgc
gaaggggaggcgatcgcgtggcacctgctggaggtgctgaagccgaaggttcccgtgaag
cgcatggtgttccacgagatcaccaaggaagcgattcagaaggccgttgacgcgacccga
gacctcgacaccgcccttgtcgacgcgcaggagacacgtcgcatcctcgaccgcctctac
ggctacgaggtcagcccggttttgtggcggcgcatcggtcccggtctgagcgccggccgc
gtgcagtcggccgcgactcgtctcatcgtcgaccgggagcgggagcgcatcgccttcgtc
tcggccagctactgggacctcgacacgaccctcactccggccgccgagaacgcaccgttc
gcggctcggctgtcgcgacttggcggcagcaaggtcgcctccggtcgcgacttcgatgac
cgcggccagctgaaggcgaaggacgcggtggcgctggacgaggccaccgtgacgaacctc
gccgaggcgctgcgcgcatccgacctgcagctcaccgtcacgagcgtcgagtcgaagccg
tacacgcggcgccccgccgcgccgttcaccacctcgacgctgcagcaggaagccggccgc
aagctgcgcttcaccgcacgccagacgatgtcggtcgcgcagtcgctgtacgagaacggc
tacatcacctacatgcgcaccgactcggtcacgctgtcgcagcaggccgtcgacgcggcc
cgcagccaggcccgcgacctgtacggcgcagacttcgtgcccgacaaaccacgcctctac
agcggcaagagcaagaacgcgcaggaggcgcacgaggccattcgccccgcgggtgacgtc
ttccgcacccccagccagctcgagggcacgctgcgcggcaacgactggaagctctacgac
ctcatctggaagcgcaccgtcgccagccaaatggcggatgcacgcggccagacggcctcc
atcgcgatggccacgggccccctcacgagcgcggacgcgcgcgtctcggggcaggtcgcc
gagttcgcggcgagcggcaccgtcatcaccttccgcggtttccttgccgcgtacgaggag
ggccgcgacgaggagcgcaacgccgaccccgctgaggcgaaggaggcgacgctgccgccg
ttgaccgagggccaggcgcttggtgtcatcgacgtcgagccaaagggtcacgagacgagc
ccgccgccgcgctacaccgaggcgagcctcgtcaaggcgttggaagagcgcggcatcggc
cgaccctcgacctacgcgtcgatcatctcgaccatcatcgaccgcggctacgtcgccccg
cgcggctcggcgctcgtgcccggctgggtcgcgttcagcgtcgtcaagctgctcgagcag
cacttcggcgacctcgtcgagtacgacttcaccgccgagatggaggccgacctcgaccgc
atcgcccgcggcgaggccgaccgcaccgactggttgacggccttctacttcggcgacgac
cggcagccgggcctgcgccccgtcgtcgacaacatcggcgacatcgacgcccgtgccatc
aactcgattccgatcgccgaggcgatcacgctgcgcgtcggcaagtacggccccttcctc
gaggttgacgagggcggagacaccccgcgccgggtcaacattccgcaagacatggctcct
gacgagctcaccccgacccgagcgcaagaactcgtcgacgctcccgtcgtcggcgaccgc
gagctcggcatcaaccccgccacgggcaagatggtcgtcgcgaaggacggccgcttcggg
ccgtacgtgaccgaggtggatcccgcccccgagccacaggccgacgccgctaccggcgaa
gtcgttgatgaggcacccgcgaaggcgcccgcccgcggaaagaaggcggccgccgagaag
ccgcgcacggcatccctgttcaaggacatgtcgccggacacgatcgatctcgacacggcg
attcgcctgctcgacctgccgcgcacggtcggtgacgaccccgagagcggtgacacgatc
acggcgcaaaacgggcggtacggcccgtacctgaagaagggcgccgacacgcgatcgctc
gacagtgaggcgcagatcttcgagatcgatctggccggcgcgctcgaaaagttcgcccag
ccgaagtacggtgcccgcaaggcctccagcgcgctgaaggaattcgacgccgaccccgtg
agcggcaagccgatcaagctgaaagacggccgcttcggcccctatgtcaccgacggcgag
acgaacgcgaccgtgccgcgcggcgaagacccgatggaaatcgacttcgagcgcgccgtg
caactcatcgcggacaagcgtgcgaaggggccggccaagaagccggccgcgaagcgcggg
acggccgccaagaagccggcggcgaagaagacccccgccaggaagccggctaccaagaag
cccgcggcgacaaagaccgccgcgaagaagaccccgccggccgccgaatga
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