Microcella alkaliphila: MalAC0309_0972
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Entry
MalAC0309_0972 CDS
T05359
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
malk
Microcella alkaliphila
Pathway
malk03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
malk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
MalAC0309_0972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
malk03400
]
MalAC0309_0972
Enzymes [BR:
malk01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
MalAC0309_0972
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
MalAC0309_0972
DNA repair and recombination proteins [BR:
malk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
MalAC0309_0972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Auto_anti-p27
TackOD1
Motif
Other DBs
NCBI-ProteinID:
BAU31836
UniProt:
A0A0U5BMP3
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All DBs
Position
978985..979914
Genome browser
AA seq
309 aa
AA seq
DB search
MPELPEVEVVRHGLAPAVTGATIERVEVLDERSLKRHDGPAEDFIDRLTGARIVAPVRRG
KFLWMPVAVGDGSFGDPVEALVVHLGMSGQVLLRSRGADDGPLTRIRFEIVHPEHGELLV
NFVDQRIFGSMALDVLQQTPDGAAGGYGSSLALVPGQVAHISRDPLDPAFDDAAFVAALR
RRRTGIKRALLDQTLVSGIGNIYADEALWAARLHYDWPTASLPVARVRELLTEVRVVLAR
ALEEGGTSFDAQYVNVNGASGYFSHSLRAYGQQGKACSRCGGLIVREQFMNRGSHFCPRC
QPRPRRRAA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
gtgcctgaactgcccgaagtcgaggtcgtccgtcacggcctcgcccccgccgtcacgggc
gcgactatcgagcgcgtcgaggtgctcgacgagcgctcactgaagcgccacgacggtccc
gcggaggacttcatcgaccggctgacgggcgcgcgcattgtcgcgcccgtgcggcgcggc
aagttcttgtggatgcccgtggccgtcggcgatggatccttcggcgaccccgtcgaggcc
ctcgtcgtgcacctgggcatgagcgggcaggtgctgttgcgctcgcgaggtgcggacgat
gggccgctgacgcgcatccggttcgagatcgtgcacccggagcacggcgagctgctcgtg
aactttgtggaccagcgcatcttcgggtcgatggcactcgatgtgctgcagcagacgccg
gacggggcggccggtgggtacgggtcgtctctcgcgctcgttcccggccaggtggcgcac
atttcacgtgacccgctcgacccggcgttcgacgatgcggcgttcgtcgcggcgctgcgg
cggcgccgcacgggcatcaagcgggcgttgcttgaccagacgttggtgagcggcatcggc
aacatttacgccgacgaggcgctgtgggcggcgcgcctgcactacgactggccgaccgcg
tcgctgcccgttgcgcgcgttcgcgagctgctcaccgaggtgcgcgtggtgttggcgcgg
gcgctcgaggagggtggcacgtcgttcgacgcccagtacgtcaacgtgaacggcgcttcg
gggtatttcagccattcgctgcgcgcctacggccagcagggtaaggcgtgctcgcggtgc
ggaggtctgatcgtgcgtgagcagttcatgaaccgcggctcgcacttctgcccgcgctgc
cagccgcgcccccgccgccgcgccgcctga
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integrated database retrieval system
