Microcella alkaliphila: MalAC0309_0998
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Entry
MalAC0309_0998 CDS
T05359
Symbol
uvrD3
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
malk
Microcella alkaliphila
Pathway
malk03420
Nucleotide excision repair
malk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
malk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MalAC0309_0998 (uvrD3)
03430 Mismatch repair
MalAC0309_0998 (uvrD3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
malk03400
]
MalAC0309_0998 (uvrD3)
Enzymes [BR:
malk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MalAC0309_0998 (uvrD3)
DNA repair and recombination proteins [BR:
malk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MalAC0309_0998 (uvrD3)
MMR (mismatch excision repair)
Other MMR factors
MalAC0309_0998 (uvrD3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
CBP_BcsQ
Motif
Other DBs
NCBI-ProteinID:
BAU31861
UniProt:
A0A0U5BJV3
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All DBs
Position
1007419..1009164
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AA seq
581 aa
AA seq
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MTTVTADRLLAQLDDRQREVAEALIGPVCVLAGAGTGKTRAITHRIAYGVSTGAYDPRRV
MALTFTTRAAGELLGRLRALGAEGVAARTFHSAALRQLAYFWPTVVGGSPPRVLDGKGPL
LGQAAQSLRISVDTAALRDLAAEIEWRKVSRLSIEQYATRAPSRSMPGGLTVEQVVDLQR
RYEDVKDERRQIDFEDVLLATAGMLENEPRVAEQVREQYRFFVVDEYQDVSPLQHDLLML
WLGGRRELCVVGDASQTIYSFTGATSDYLVRFGTEFPEAAIVRLEDNYRSTPAIVDTANR
LMRGRPGALTLRAATPGADGDNRVEGTRAHGVAPSIRGHADDAAEAAYVAEQVAQRIADG
AAPESIAVLYRINTQSIALEAALRRQGIPVQSRANSRYFDQPEVRQALMLLRGASVAVGD
EPLFKSVSDVLRGLGWRQDPPTGGGAERARWDALNALLALAEEAPAGTTLAQFVDELRAR
AEQQHAPTISAVTLSTLHAAKGLEWDHVHIVGLSEGLVPISYAGTDLAAIDEERRLLYVG
VTRARRTLDLSWAATGANSRGERAPSRFLAELSPPRSASRR
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgtcacggcagaccggctgctcgcccagctcgacgaccgacaacgggaagtc
gccgaggctctcatcggtcccgtctgcgtgctcgcgggcgccggcaccggcaagacccgc
gcgatcacccaccgcatcgcctacggcgtatcgacgggggcgtacgacccgcgtcgcgtg
atggcgctcaccttcacgacccgcgcggccggtgaactgctcggtcggttgcgcgcgctc
ggcgccgagggggtcgctgcccgcaccttccactcggcggcgctgcgccaactggcctac
ttctggccgacggtcgtcggcggctccccgccccgcgtgctcgacggtaagggcccgctg
ctcggccaggccgcgcagtcgttgcgcatcagcgtcgacaccgccgccctgcgcgatctc
gccgccgagatcgagtggcgcaaggttagccggctgtcgatcgagcagtacgcgacccgg
gcgccgagccgcagcatgccgggcggcctcacggtcgagcaggtcgtcgacctccaacgc
cgatacgaagatgtgaaggacgagcgtcgccagatcgatttcgaagacgtgctgctcgcc
accgccgggatgctcgaaaacgaaccgcgggtcgccgagcaggttcgcgagcagtaccga
ttcttcgtcgtcgacgagtatcaagacgtctcgccgctgcagcacgacctgctcatgctg
tggctcggcggcaggcgcgaactgtgtgtcgtcggcgacgcctcgcagacgatctactcg
tttacgggtgccacgagcgactatctcgtgcgattcggcaccgaatttcccgaggcagcc
atcgtgcggttggaagacaactaccggtcgacgcccgcgatcgtcgacaccgcgaaccgg
ctcatgcgcggtcggcccggcgccctgacgttgcgggcagcgacgccgggtgctgatggc
gacaaccgcgtggaggggacgcgggcgcacggggttgccccgagcatccggggtcacgcc
gacgacgcggccgaagcggcgtacgtcgccgagcaggtcgctcagcgcatcgccgacggc
gccgcaccggaatcgatcgccgtgctgtaccgcatcaacacccagtcgatcgccctcgag
gcggccttgcgccggcagggcatccccgtgcagtcgcgcgcgaacagtcgatacttcgac
cagcccgaggttcgccaggcgctcatgctgttgcgcggcgcctccgtcgccgtcggcgat
gagccgctgttcaagagcgtcagcgacgtgctccggggtctcggctggcggcaggaccca
ccgaccggcggcggggccgaacgcgcgcggtgggatgcgctcaacgcgctgctggcgctc
gccgaggaggcgcccgccggaacgaccctcgcccagttcgtcgacgagctgcgcgcccgc
gccgagcagcagcacgcgcccacgatctcggcggtcacgctgtcaaccctgcacgccgcg
aagggcctcgagtgggaccacgttcacatcgtcggcctgtcggaaggtctcgtgccgatc
agctacgcgggcaccgacctggcggcaatcgacgaggagcggcgcctgctgtacgtgggc
gtaacccgcgcgcgacgaacgctcgacctgtcgtgggcggcgaccggcgcgaactcgcgc
ggagagcgcgcgccgagccgcttcctcgcggagctcagcccgccgcgatcggcgtcacgc
cgctga
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