Microcella alkaliphila: MalAC0309_1245
Help
Entry
MalAC0309_1245 CDS
T05359
Symbol
deaD
Name
(GenBank) superfamily II DNA and RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
malk
Microcella alkaliphila
Pathway
malk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
malk00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MalAC0309_1245 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
malk03019
]
MalAC0309_1245 (deaD)
03009 Ribosome biogenesis [BR:
malk03009
]
MalAC0309_1245 (deaD)
Enzymes [BR:
malk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
MalAC0309_1245 (deaD)
Messenger RNA biogenesis [BR:
malk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
MalAC0309_1245 (deaD)
Ribosome biogenesis [BR:
malk03009
]
Prokaryotic type
rRNA helicases
MalAC0309_1245 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
HEM4
UvrA_inter
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BAU32102
UniProt:
A0A0U5BPB3
LinkDB
All DBs
Position
complement(1239896..1241800)
Genome browser
AA seq
634 aa
AA seq
DB search
MSRPFPRTVRGMTPPETPDTTEADNADTLPKFSELGLSDAVMRALTDVGYETPSAIQAAT
IPTLLGGRDVVGLAQTGTGKTAAFALPILSRLDVSQRTPQALVLAPTRELALQVCEAFER
YAAHLPGVSVLPVYGGQGYGVQLSALRRGVHVIVGTPGRIMDHLDKGTLDLSELKYLVLD
EADEMLKMGFAEDVETILADTPDDKQVALFSATMPASIRRIAQQHLNDPEEISVKTKTTT
SSTITQRYLVVSYQQKVDALTRILEVENFDGMIVFVRTKNETETLAEKLRARGYSAQAIN
GDVPQVQRERTVEQLKNAKLDILVATDVAARGLDVERISHVVNFDIPVDTESYVHRIGRT
GRAGRTGDAISFVTPRERRLLDAIERATRQPLTQMHLPTIDDVNATRLTRFDDAISEALN
KTELIDTFRGIIDHYVEHHDVPEADVAAALAVVAQGGTPLLLTEDDIRPPKMPRDDRSRD
AGGRDGGRDARGDSERPPRRERRNGPPLAPYRIEVGRRHRVEPRQIVGALANEGGLSRDD
FGAIDIKLDFSIVELPAEMSTATLKKLADTRISGRLIELKSDRGPRKKDRGGFRDRDDRA
GRAGDSRASDARGSFSRDGDDRPARKPRQKRRDG
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgcgaccgttcccgcgtaccgttaggggtatgacgcctccagagacgcccgatacg
accgaggccgataacgccgacaccctcccgaagttctccgaactcggcctgagcgacgcc
gtcatgcgcgcactgaccgacgtcggctacgaaaccccctccgccatccaggcggcgacg
attccgacgctgctcggtgggcgtgacgtcgtcgggctcgcccaaaccggcaccggcaag
acggccgcgttcgcgttgccgatcctgtcgcgcctcgacgtgtcgcagcgcacaccgcag
gcgctcgtgctcgcccccacccgcgagctcgctctgcaggtctgtgaggcgttcgagcgc
tacgccgcacaccttcccggcgtgagcgttctgcccgtctacggcgggcagggctacggc
gtgcagctgtcggcgctgcgccgcggcgtgcacgtcatcgtcggcacgcccggccgcatc
atggaccacctcgacaagggcaccctcgacctgtctgagctgaaatacctcgtgctcgac
gaggcggacgagatgctgaagatgggattcgccgaggacgtcgagacgatcctcgccgac
acgcccgacgacaagcaggtcgccctgttctcggcgaccatgcccgcctctattcgccgg
atcgcgcagcagcacctcaatgatcccgaggaaatcagcgtcaagaccaagacgaccacc
tcgtcgacgatcacgcagcgctacctcgtcgtgtcgtaccagcagaaggtcgacgccctc
acgcgcatcctcgaggtcgagaacttcgacggcatgatcgtgttcgttcgcaccaagaac
gaaaccgagacgctggccgagaagctgcgcgcccgcggatactccgcccaggcgatcaac
ggcgacgtgccgcaggtgcagcgcgaacgcacggtcgagcagctgaagaacgcgaagctc
gacatcctcgtcgctaccgacgtcgccgcccgcggactcgacgtcgagcgcatcagccac
gtcgtcaacttcgacatccccgtcgacaccgagagctacgtgcaccgcatcggccgcacg
ggccgcgccggccgtacgggcgacgcaatcagcttcgtcactccgcgcgagcgccgcctc
ctcgacgcgatcgaacgcgccacccgccagccgctcacacagatgcacctgccgacgatc
gatgacgtcaacgccacgcgactcacccgtttcgacgacgccatcagcgaggcactcaac
aaaaccgagctcattgacaccttccgcggcatcatcgaccactatgtcgagcaccacgac
gtgcccgaggccgacgtcgccgccgcgctcgcggtcgtcgcgcagggcggtactcccctg
ctgctcacggaggacgacatccgcccgccgaagatgccgcgcgacgatcgctcgcgggat
gccggcggccgagatggcggccgggatgctcgcggcgactcagagcgcccgccgcgtcgc
gaacgccgtaacggtccgccgctcgcgccgtaccgcatcgaggttggccgccgtcaccgc
gttgagccgcgccagatcgtgggcgcactcgccaacgagggtggtctctcgcgcgacgac
ttcggcgcgatcgacatcaagctcgacttctcgatcgtcgaactgcccgctgagatgtcg
accgccacgctcaagaagctcgccgacacccgcatcagcgggcgcctcatcgagttgaag
agcgaccgcggcccgcgcaagaaggaccgcggcgggttccgcgaccgcgatgaccgcgca
ggtcgcgctggcgactcgcgcgccagcgacgcgcgcggcagcttctcccgcgacggtgac
gaccgcccggcccgcaagccccgccagaagcgccgcgacggctag
DBGET
integrated database retrieval system
