Microcella alkaliphila: MalAC0309_1306
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Entry
MalAC0309_1306 CDS
T05359
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
malk
Microcella alkaliphila
Pathway
malk03030
DNA replication
malk03430
Mismatch repair
malk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
malk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MalAC0309_1306 (dnaE)
03430 Mismatch repair
MalAC0309_1306 (dnaE)
03440 Homologous recombination
MalAC0309_1306 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
malk03032
]
MalAC0309_1306 (dnaE)
03400 DNA repair and recombination proteins [BR:
malk03400
]
MalAC0309_1306 (dnaE)
Enzymes [BR:
malk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MalAC0309_1306 (dnaE)
DNA replication proteins [BR:
malk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MalAC0309_1306 (dnaE)
DNA repair and recombination proteins [BR:
malk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MalAC0309_1306 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
BAU32163
UniProt:
A0A0U4NV00
LinkDB
All DBs
Position
1304059..1307568
Genome browser
AA seq
1169 aa
AA seq
DB search
MSADSFVHLHVHSEYSMLDGAARVKPLIEEAVAQGMPAIAVTDHGNMFGAFDFWRTATEA
GIKPIIGTEAYLTPGTHRTDKTRVKWGGGGEDDVSGAGAYTHITMVAQSTTGLHNLFRMS
SLASIEGYYFKPRMDRELLSRYSEGVIATTGCPSGEVQTRLRLGQYDKAVEAAAEFRDIF
GKENYFAEIMDHGLGIERRIMSDLIRLAKELDLPLVATNDLHYTHPGDASSHAALLCVQS
GSTLDDPNRFKFDADEFYLKSAREMRELFRDHPEACDNTLLIAERVDTQFDTNANYMPRF
PVPEGETEDSWFIKEVWAGLERRYPNGISDRVKAQAEYEIGVITQMGFSGYFLVVADFIN
WSKDNGIRVGPGRGSGAGSMAAYAMRITDLDPLEHGLIFERFLNPDRVSMPDFDVDFDDR
RRGEVIRYVTEKYGDERVAQIVTYGTIKAKQALKDSSRVLGFPFGMGEKLTKAMPPSVMG
KDMPLSGMYDKDHPRYKEANDFRAVIDTDPDARRVFDTALGLENLKRQWGVHAAGVIMSS
EPLIDIIPIMKREQDGQIVTQFDYPACESLGLIKMDFLGLRNLTIIDDALDNIRANRGTE
LVLEDLTLDDPAAYELLARGDTLGVFQLDGGPMRSLLRMMKPDNFEDISAVLALYRPGPM
GADSHTNYALRKNGRQPITPIHPELAEPLEEVLGTTYGLIVYQEQVMAIAQKLAGYTLAQ
ADLLRRAMGKKKKSELDKQYEGFQAGMAANGYSPEATKTLWDILLPFSDYAFNKAHSAAY
GVVSYWTAYLKAHYPAEYMAALLTSVGDSKDKMAVYLNECRRMGITVLPPDVNESIEYFA
AVGDDIRFGLGAVRNVGHNVVEGIRQARDEKGRFTGFHDFLKKVPTPVANKRAIESLIKA
GAFDSLGDTRRALMEIHEGAVEAAVKEKRAEDKGDIGFDFDSLFDEGEATAATVPARPEW
AKKDKLAFEREMLGLYVSDHPLAGLESALAKHAGVGIAELNDNPPDDGEKVTVAGLITSV
QHRVARQSGNPYGMITLEDFGGELTVMFLGKSYQEFAQGLVADTIVVVTGRVNHRDDGIT
LQANLLRTPDFGVSTDSGPIVLSVREQRATVDVVAELDAVLNRHRGDTEVRLRLVRDDTA
RVFELPHRIDTTAGFFGEVKSLLGPRALA
NT seq
3510 nt
NT seq
+upstream
nt +downstream
nt
atgagcgccgactcgttcgttcacctgcatgtgcacagcgagtactccatgctcgacggg
gcagcgcgcgtcaagccgttgatcgaggaggcggtggcccagggcatgcccgccatcgcg
gtcaccgaccacggcaacatgttcggcgccttcgacttttggcgcaccgccaccgaggcc
ggcatcaagcccatcatcggcacagaggcctacctcacgcccggcacgcaccgcaccgac
aagacccgcgtgaagtggggcggcggcggcgaagacgacgtgtcgggtgccggcgcttac
acgcacatcacgatggttgcgcagtcgacgacgggcctgcacaacctcttccgaatgtcg
tcgctcgcctccatcgagggctactacttcaagccccgcatggaccgcgaactactcagc
cgctacagcgagggcgtgatcgcgacgaccggatgcccgagcggcgaggtgcagacgcgc
ctgcggctcggccagtacgacaaggcggtcgaagccgcagccgagtttcgcgacatcttc
ggcaaagagaactacttcgccgagatcatggaccacggcctcggcatcgagcgccgcatc
atgagtgacctgattcgcctcgcgaaagagctggacctgccgctcgttgccaccaacgac
ctgcactacacgcaccccggcgacgccagctcgcacgcggcgctcctgtgcgtgcagtcg
ggctcgaccctcgacgacccgaaccgcttcaagttcgacgccgacgagttctacctcaag
tcggcccgcgagatgcgcgagctgttccgcgatcaccctgaagcatgtgacaacactctg
ctcatcgccgagcgcgtcgatacccagttcgacaccaacgccaactacatgccgcgcttc
cccgtccccgagggcgagacggaggacagctggttcatcaaggaggtctgggccgggctg
gaacgccggtacccgaacggcatcagtgaccgggtgaaggctcaggccgagtatgagatc
ggcgtcatcacccagatgggcttctcggggtacttcctcgtcgtcgccgacttcatcaac
tggtcgaaagacaacggcattcgcgtgggccccggccgcggttccggtgccggctcgatg
gccgcctacgccatgcgcatcaccgatctcgaccccctcgagcacggactcatcttcgag
cgcttcctcaaccccgaccgcgtctcgatgcccgacttcgacgtcgacttcgacgaccgt
cgccgcggcgaggtgatccgctacgtcaccgagaagtacggcgacgagcgcgtcgcccag
atcgtcacctacggcacgatcaaggccaagcaggcgctgaaggactcgtctcgcgtgctc
ggcttccccttcggcatgggggagaagctcacgaaggcgatgccgccgtccgttatgggc
aaagacatgcccctgtcgggcatgtacgacaaggaccacccgcgctacaaggaggcgaac
gacttccgcgcggtgatcgacaccgatccggatgcccggcgcgtcttcgacacggcgctc
gggctcgagaatctgaagcgccagtggggcgtgcacgcggccggcgtcatcatgtcgagc
gagccgctcatcgacatcatcccgatcatgaagcgcgagcaggacggccagatcgtcacg
cagttcgactaccccgcgtgcgaatcgcttgggctgatcaagatggacttcctggggctg
cgtaacctcaccatcatcgatgacgcgctcgacaacatccgcgcgaaccggggcaccgag
ctggttctcgaagacctgacactcgatgaccccgccgcgtatgaactgttggcccgcggc
gacacactcggggtcttccagctcgatggcggccccatgcgctcgctcttgcgcatgatg
aagcccgacaacttcgaagacatctccgccgtgctcgcgctgtaccgtccggggccgatg
ggtgccgacagccacaccaactacgcactgcgcaagaacggccgtcagccgatcacgccc
atccatcccgagctggccgagccgctcgaagaggtgctcggcacgacctacggcctcatc
gtctaccaagagcaggtgatggcgatcgcccagaagctcgccggctacacactcgcccaa
gccgacctgttgcgccgcgccatgggcaagaagaagaagtccgagctcgacaagcagtac
gagggcttccaggcgggcatggccgcgaacggctactcgcccgaggcgacgaagacgttg
tgggacatcctcctgcccttctcggactacgcgttcaacaaggcgcactcggccgcctac
ggtgtcgtgtcctactggaccgcctacctgaaggcgcactacccggccgagtacatggct
gccctactgacgagcgtcggcgactcgaaagacaagatggcggtgtacctgaacgagtgc
cgccgcatgggcatcaccgttctgccgcccgacgtcaacgagtccatcgagtacttcgcc
gccgtcggcgacgacatccgtttcgggctcggcgccgtgcgcaacgtcggccacaacgtc
gtcgagggcatccgtcaggctcgcgacgagaagggccgcttcacgggcttccacgacttt
ctgaagaaggtgccgacgccggttgcgaacaagcgcgcgatcgagtcgctcatcaaggct
ggtgcgttcgactccctcggcgacacgcgccgcgccctgatggagatccacgagggggcg
gtcgaggcggccgtcaaagagaagcgggcggaagacaagggcgacatcggcttcgacttc
gacagcctgttcgacgagggggaggcgacggccgccaccgtcccggcacggccggagtgg
gcgaagaaagacaagctggccttcgagcgcgagatgctcggcctgtacgtctccgaccat
ccgctcgcgggactcgagagcgcgttggccaagcacgccggcgtcggcatcgcggagctc
aacgacaaccctcccgacgacggcgagaaggtcactgtcgcggggctgatcacgagcgtc
cagcaccgcgtcgcccgacagtcaggcaacccctacgggatgatcacgctggaagacttc
ggcggggagctcaccgtcatgttcctcggcaagtcgtaccaagagttcgcccagggtctc
gttgccgacaccatcgtggtcgtcacgggtcgcgtcaaccaccgcgacgacggcatcacg
ctgcaggccaacttgctgcgcacgcccgacttcggggtgagcaccgattccggtccgatc
gtgctgtcggtgcgggaacagcgcgcgaccgtcgacgtcgtcgccgagctcgatgccgtg
ctgaatcgtcaccgcggcgacaccgaggtgaggctgcgcctcgtgcgcgacgacaccgcg
cgcgtcttcgagctgccccaccgcatcgacacgaccgccggattcttcggcgaggtaaag
agcctgctcggcccgcgcgcgctcgcctaa
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