Microcella alkaliphila: MalAC0309_2170
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Entry
MalAC0309_2170 CDS
T05359
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
malk
Microcella alkaliphila
Pathway
malk03420
Nucleotide excision repair
malk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
malk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MalAC0309_2170
03430 Mismatch repair
MalAC0309_2170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
malk03400
]
MalAC0309_2170
Enzymes [BR:
malk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
MalAC0309_2170
DNA repair and recombination proteins [BR:
malk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MalAC0309_2170
MMR (mismatch excision repair)
Other MMR factors
MalAC0309_2170
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
BAU33013
UniProt:
A0A0U5BNB3
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All DBs
Position
complement(2154271..2157609)
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AA seq
1112 aa
AA seq
DB search
MTTAPAAVSANQIADALGLHRPTDEQRAVIEAPLGPALVVAGAGSGKTETMSARVLWLVA
NGHVAPDEVLGLTFTRKAASELAHRIRERLGALGRSSLASDAAHPLPAVDAFTQPTVATY
NAFASSLYRDNAVLIGRDPDGTVLGAAAAWQLARGIVARATDERLADHDLSVDRVTTAVL
DLAHSLTEHLADPADVRALLDEFAGVVELPAGGRGTYPDVDKLAEALAPTTPLLDLAAEF
AARKHRDGLIEFSDQVALALDLVERHPEVGEALRSRYRVVLLDEYQDTNVAQTRLLAALF
AGTPVMAVGDPHQSIYGWRGASATNLDDFATRFTVDGRSSVDRYALSTSWRNGTAILDVA
NALVEPLTARGGVAVGRLAPSPSASEHPVESRQCETVDEEAELVAEWFASQLGIDARGAR
RIDGDDAGPGASAPSTAALLMRSRATQPIFLDALRRRGVPFHVLGIGGLLSQPEIADLVS
ALHVIDDPSAGTELVRLLAGPRWSIGLADLDALRRVAHWLRERDLAHQRFSEEVRERLRA
SVVGGDSASLVDALDFVAHATPGHGQLAEFSDAGLERLREAGALFASLRRRTSLDLADLV
AVVEHELLLDIEVAANPYRVLGEAPRDAFLDALDDYLGLADEVSLGGFLRWLREAEWRDN
LSPRTEDAEPGTVQVLTIHGSKGLEWDAVAVPRFVDDELPSKPRSTRGWLSLGVLPYELR
GDSAELPVFAWRGAESRKELLDRQKQFQADVAEHLEREERRLAYVAVTRARHRLLVTGSF
WASATKPRAFSRFLAPLIERGLIPPVADTSRHEHNPRASDDDDAPWWPADPLGTRREALE
AAAARIHAAASGGQGGDDDVSADSASDALGWQRDIDLLLAERADRERRGHEIAVPYRVPA
SAFRQYVTEPEAVAERLRRPVPQRPYRQTRLGTVFHRWVEQRYGLTAVPDRIDDALNGAL
DAAFTHDDGGEGVDPAALDALRQRFAASEWGDREPREVECEIHLPFAGHLIICKLDAVYP
ARLRGDDGRFIDGVEVVDWKTGKAPSTDEERAEKLLQLALYRLAYARRTGRPLDEISVAL
YFVADDLVLRPEQLPGEAELVELWRTAVTTRG
NT seq
3339 nt
NT seq
+upstream
nt +downstream
nt
atgacgaccgcccccgccgccgtgagtgcgaaccagatcgccgacgccctcggcctgcac
cgaccgaccgacgagcagcgcgccgtcatcgaggcgcccctcgggcccgccctcgtcgtc
gccggcgccggctcgggcaagaccgagaccatgtcggcccgcgtgctgtggctcgtcgcc
aatggccacgttgcgcccgacgaggtgctcggcctgaccttcacccgcaaggcggcgtca
gaactcgcccaccgcatccgcgaacgcctgggcgcgctcggccggtcgtcgctcgcgagc
gacgccgcgcatcccctacccgccgtcgatgcgttcacgcagccgacggtggcgacctac
aacgccttcgcctcgagcctgtaccgcgacaacgcggtgctcatcgggcgcgaccccgac
ggtacggtgctcggcgctgcggcggcgtggcagctggcgcgcggcatcgtcgctcgcgcc
accgacgagcggctcgccgaccacgacctcagcgttgaccgggtgacgacggccgttctc
gacctggcgcactccctcaccgaacacctcgctgacccggcagatgtgcgggcgctcctc
gacgagttcgcgggcgtcgtcgagctgcccgcgggcggccgcggcacgtaccccgacgtc
gacaagcttgccgaggcgctcgcaccgacaacgccgctgctcgacctcgcggccgagttc
gccgcccgcaaacaccgcgatgggctcatcgagttctctgaccaggtcgcgctcgcgctg
gatctcgtcgaacggcaccccgaggtcggtgaggccctgcggtcgcgctaccgcgtcgtg
ttactcgacgaataccaagacacgaacgtcgcccagacgcggctgcttgccgcgctcttc
gcgggcaccccggtcatggcggtcggcgacccgcaccagtcgatctacggctggcgcggg
gcgagcgcgaccaaccttgacgacttcgccacgcgcttcaccgtcgacgggcgctcgagc
gtcgaccgctacgccctcagcacctcgtggcgcaacggcacggcgatcctcgacgtggcg
aacgcgctagtcgagccgctgacggcacgcggcggcgtcgccgtcggtcggcttgctccc
tcgcccagcgcgagcgagcatccggtcgaatcgcgccagtgcgagacggtcgacgaggag
gccgagctcgttgccgaatggttcgcctcccagctcggaatcgacgcgcgtggcgcgcgc
cgcatcgacggcgacgacgcgggcccgggggcgtcagcgccatcgacggcggcgctattg
atgcgcagccgcgcgacgcagccgatcttcctcgacgctcttcgtcgtcgaggcgtgccg
tttcacgtgctgggcatcggcgggctgctcagtcagcccgagatcgccgacctcgtgtcg
gccctgcacgtcattgacgacccgtcggccggcaccgaactggtgcggctgctcgccggc
ccccgctggtcgatcggtctcgccgacctggatgcgctccgccgcgtcgcacactggtta
cgtgagcgcgatctcgcccaccagcgcttcagcgaggaggtgcgcgagcggctgcgcgca
tccgttgtgggcggtgacagcgcctcgctcgtcgacgcgctcgacttcgtcgcgcacgct
acccccggccacggtcagctcgccgaatttagcgatgcggggctcgagcgactgcgtgag
gcgggcgcgctttttgccagcctgcggcggcgcacctcgctcgacctggctgacctggtc
gccgtggtcgaacacgagctgctgctcgacatcgaggtcgcagcgaacccttaccgggtg
ctcggtgaggctccgcgcgacgccttcctcgacgccctcgacgactacctcgggctcgcc
gacgaggtgagcctcggcgggttcctgcgatggctgcgcgaggccgagtggcgcgacaac
ctctcgccccgcaccgaagacgccgaacccggcaccgtgcaggtgctcacgattcacggc
tcgaaaggtctcgagtgggacgcggtcgccgtgccgcgcttcgtcgacgatgagctgccg
tcgaagccgcgctcgacccgtggctggctgagtctcggcgtgctgccgtacgagctccgc
ggagactctgccgagctgccggtcttcgcctggcgcggagcagagagtcgcaaagagctg
ctcgaccggcagaagcagttccaggctgacgtcgccgagcacctcgaacgcgaagagcgc
cgcctcgcctacgtcgccgtgacgcgtgcccgccaccggctgctcgtgaccggctccttc
tgggcctcggccacgaagccccgagccttcagccggttcttggccccgctcatcgagcgc
ggcctgatcccgcccgtcgccgacacctcccgccacgaacacaacccccgcgcgagcgac
gatgacgacgcgccctggtggcccgccgacccgctcggcacccggcgcgaggcgctggag
gcggccgcggcgcgcatccatgcagcggcctcgggtggccagggtggcgacgacgacgtg
tcggccgattccgcgagcgacgccctcggctggcaacgcgacatcgacctgctgctcgcc
gagcgcgccgatcgtgagcgccgcgggcacgagatcgccgtgccgtaccgcgtgccagcc
tcggcgttccggcagtacgtcaccgagcccgaggcggtcgccgagcgcctgcgccgcccg
gtgccgcagcgcccctaccggcagacccgccttggcacggtgttccatcgctgggtcgag
cagcgttacggcctcacggcggtgcccgaccgcatcgacgatgcactcaacggtgcgctc
gacgccgccttcacccacgacgacgggggagagggcgtcgaccccgccgccctcgatgcg
ttgcggcaacgcttcgcggcctcggagtggggcgaccgcgaaccgcgtgaggtcgagtgc
gagattcacctgccgttcgccgggcacctcatcatctgcaagctcgacgccgtgtatccg
gcgcggctacgcggtgacgatggccgcttcatcgacggcgtcgaggtcgtcgactggaag
accgggaaggcgccgagcaccgacgaggagcgcgccgaaaagctgctgcagctcgcgctc
taccgtctggcgtacgcgcgccgcaccggccggccgctcgacgagatcagcgtcgccctc
tacttcgtcgccgacgacctcgtgttgcggcccgagcagctgccgggcgaggccgagctc
gtcgagctctggcgcaccgcggtcacgactcgggggtga
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