Marinobacter alkaliphilus: PBN92_02385
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Entry
PBN92_02385 CDS
T08753
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
mall
Marinobacter alkaliphilus
Pathway
mall00300
Lysine biosynthesis
mall00470
D-Amino acid metabolism
mall01100
Metabolic pathways
mall01110
Biosynthesis of secondary metabolites
mall01120
Microbial metabolism in diverse environments
mall01230
Biosynthesis of amino acids
Module
mall_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mall00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
PBN92_02385 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
PBN92_02385 (lysA)
Enzymes [BR:
mall01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
PBN92_02385 (lysA)
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Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
WBU41773
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Position
540384..541634
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AA seq
416 aa
AA seq
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MDHFNYRNGELYAEDVPVASIAERFGTPAYVYSRATLERHYRAYDSALNGRPHLVCYAVK
ANSNLAVLNVLARLGAGFDIVSAGELERVLRAGGDAARVVFSGVGKQEWEMKRALEVGVR
CFNVESDTELDRLNKVAGELGVRAPVSLRVNPDVDAGTHPYISTGLKENKFGIDIAEAPQ
VYARAAALPNLDVHGVDCHIGSQLTSVSPFLDALDRVLVLIDTLADQGIHIRHLDMGGGL
GVTYNQEQPPQPADYVKALAERLGDRELELIMEPGRSIAANAGILLTRVEFLKCTEHRNF
AIIDAAMNDLIRPALYSAWQAIIPVQPHQDGEEKAWDLVGPVCETGDFLGKDRQLRLKAG
DLLAVRSAGAYGFVMASNYNTRNRPPELMVDGDQVHVVRRRETLDDQLGAESCLPE
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggatcatttcaattaccgcaatggcgaactgtacgccgaagatgttccggtggcgtca
atcgctgagcgatttggcaccccggcttacgtatattcccgggccaccctcgagcgtcac
tatcgggcctacgacagcgccctgaatggccgcccgcacctggtgtgctatgccgtgaag
gccaacagcaacctggcggtgctcaatgtgctggcgcgacttggcgccggttttgatatt
gtctctgccggtgagctggagcgggtgctgcgcgccggtggcgatgccgccagggtggtg
ttctccggcgttggcaagcaggaatgggaaatgaagcgggcgctggaagtgggcgtgcgc
tgtttcaacgttgaatctgacaccgagctggaccgcctgaacaaagtggccggagagttg
ggcgtgagggcaccggtatcgcttcgggtgaacccggatgtcgatgccggcacccatccc
tacatttccaccggactgaaggaaaacaagtttggtatcgatatcgccgaggcccctcag
gtttacgcccgtgccgcagcgttaccaaacctggatgtccatggagtggactgtcacatt
ggttcccagctgacgtcagtctctccgtttctggatgccctggaccgggtgttggtgctg
atcgatactctggcggaccagggcattcatatccgccatctggacatggggggcggcctg
ggcgtgacctacaatcaggaacagcccccgcagccagcggattacgtcaaggcactggcc
gagcgactgggtgatcgggagctggaactgatcatggaaccgggccgctccattgccgcc
aacgccggtatattgctgacccgcgtggagtttctgaagtgcaccgagcatcgtaacttc
gccattatcgatgccgccatgaacgacctgatccgcccggcactgtacagcgcctggcag
gccatcatcccggtacagccccatcaggatggcgaggaaaaagcctgggatctggtcggg
ccggtgtgcgaaaccggcgattttctgggcaaggatcgtcaactccggctgaaggcgggc
gatttgcttgcggttcggtcggcgggtgcctacggtttcgttatggcatccaattacaac
acccgtaaccgcccgcccgagttgatggttgacggcgatcaggtgcatgtggtgcgccgc
cgggagaccctggacgatcagcttggcgctgaaagttgcctgccggaatga
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