Marinobacter alkaliphilus: PBN92_02615
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Entry
PBN92_02615 CDS
T08753
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mall
Marinobacter alkaliphilus
Pathway
mall03030
DNA replication
mall03410
Base excision repair
mall03420
Nucleotide excision repair
mall03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mall00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PBN92_02615 (polA)
03410 Base excision repair
PBN92_02615 (polA)
03420 Nucleotide excision repair
PBN92_02615 (polA)
03440 Homologous recombination
PBN92_02615 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mall03032
]
PBN92_02615 (polA)
03400 DNA repair and recombination proteins [BR:
mall03400
]
PBN92_02615 (polA)
Enzymes [BR:
mall01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PBN92_02615 (polA)
DNA replication proteins [BR:
mall03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
PBN92_02615 (polA)
DNA repair and recombination proteins [BR:
mall03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
PBN92_02615 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PBN92_02615 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Prok-E2_E
WHD_BrxR
DUF4854
Motif
Other DBs
NCBI-ProteinID:
WBU41815
LinkDB
All DBs
Position
complement(588430..591162)
Genome browser
AA seq
910 aa
AA seq
DB search
MTEKKTPPVVLVDGSSYLFRAYHALPPLTTSKNHPTGAIKGVISMLRRLEQDFPGSKVVV
VFDAKGKTFRHDIYEEYKANRPPMPEDLAVQIEPIHEIVRAMGLPLLIVPGVEADDVIGT
LAYEATSKGIDVVVSTGDKDMAQLVSDHVTLINTMTETAMDREGVIEKFGVTPEQIIDYL
ALVGDKVDNIPGVNKCGPKTAVKWLQTYNDLDNLIEHADEIKGKIGEYLREAAGTLPLSR
ELATIRLDVDLDFGLEDLQEREQDDNSLLELFKEYEFRSWIAELENTEGSASDQRERSTE
QESAKPVDKQYSLVTEQGELDTWLQRLKAADQFAFDTETTSLRYMDAEIVGVSFAIEPGE
AAYVPLGHDYMGAPDQLDRDHVLNQLKPLLESPDVNKIGQNLKYDKNVLANHGIQLEGIG
DDTMVESYVLNSVATRHDMDSLAREYLGEQTITYESIAGKGAKQLTFNQIDLEKAGPYAA
EDADITLRLHQTLSPKLKETGKLESVYREIDLPLVPVLSRMEQRGTLISASTLRQHSQEL
AERMAELEKEAHEVAGESFNLGSTKQLQAILYDKFGLRVIKKTPKGAPSTAEPVLQELAH
EHELPRLIVEHRSLSKLKSTYTDTLPELIHHRTGRVHTSYHQAVTATGRLSSSEPNLQNI
PIRTPEGRRIRQAFIAPEGYKLLAADYSQIELRIMAHLSGDKGLLRAFEHGEDIHKATAA
EVFGVSLIEVSSDQRRSAKAINFGLIYGMSAFGLARQLEVDRKTAQEYIDRYFERYPGVL
KYMDNIRKQAHDDGYVETLYGRRLYLPEINARNKQLQQAAERTAINAPMQGTAADIIKRA
MIDVDQWLRSEHADDACMTMQVHDELIIEVREEALETVRKGLVQRMQAAAKLDVPLLVEA
GTGDNWDQAH
NT seq
2733 nt
NT seq
+upstream
nt +downstream
nt
atgactgagaaaaagaccccacccgtggttcttgttgacggatcgtcctacctgtttcgc
gcctaccatgcgctgccaccactgactaccagcaaaaaccatccgaccggagccatcaag
ggcgttatcagcatgcttcggcgtcttgagcaggatttccccggctccaaggtggtggtg
gtgttcgatgccaaaggcaaaaccttccgccatgacatctatgaagagtacaaggccaac
aggccacccatgccggaagatctggccgttcagatcgaaccgatccacgaaatcgtccgc
gccatggggctccccctattgattgttccgggcgtggaggccgatgacgtcattggcacc
ctggcctacgaagccaccagcaagggtatcgatgtggtggtctccaccggcgacaaagac
atggcccagctggtgagcgatcacgtgaccctgatcaataccatgactgaaaccgccatg
gatcgggagggggtgatcgagaaattcggggtgaccccggaacagatcatcgactacctg
gccttggtgggtgacaaggtggataacattccgggcgtgaacaaatgtggcccgaaaacc
gcggtgaaatggctgcagacttacaacgatctcgacaacctgatcgaacacgccgacgag
atcaaaggcaagatcggtgaatacctgcgggaagccgccggcaccctgcccctgagccgg
gaactggccaccatccgcctggatgtcgacctggacttcggcctggaagatctgcaggag
cgggaacaggacgacaattccctgctggaactgttcaaggagtacgaattccgcagctgg
attgctgagttggagaacaccgaaggttccgccagcgaccaacgtgagcgctccaccgag
caggaatccgcaaaaccggtagacaaacagtattccttggttaccgagcagggagagctg
gatacctggctgcaacgactgaaagccgccgaccaattcgctttcgacaccgaaaccacc
agcctgcgctatatggacgccgaaatcgtgggtgtgtcttttgctatcgagccgggggaa
gcggcctatgtacctctgggccacgattacatgggggcaccggatcaactggaccgcgac
catgtgcttaaccagctcaaacccctgctggaaagcccggacgtgaacaagatcggccag
aacctgaagtacgacaagaacgtgctcgccaaccatggtatccagctggagggcatcggc
gacgacaccatggtggagtcctatgtactcaactcagtggccacccgccacgacatggat
agcctggcccgggagtatctgggcgagcaaaccattacttacgaatccatcgccggaaag
ggcgccaagcagctcaccttcaatcagattgatctggagaaagcaggcccctacgcagcc
gaagacgccgacattacccttcgtctgcaccagactttgagcccgaaactgaaagaaacc
ggcaagctggaatcggtgtaccgggagatcgacctgccgctggtaccggtgctgtcacgc
atggaacaaagaggcactctgattagcgccagcaccctgcgccagcacagccaggaactg
gccgagcgcatggcggaactggagaaagaggcccacgaggtggccggcgaaagcttcaac
ctggggtccaccaagcagttgcaggccattctgtacgacaagttcggcctgcgcgtgatc
aagaaaactccgaagggtgcaccctccaccgccgagccagtattgcaggaactggcccat
gagcacgaactgccccgactgattgtagagcaccgcagcctgagcaagttgaagtccacc
tacacggacaccctgccagagctgatccatcaccgcaccggccgtgtacacacctcctac
catcaggcggtgactgccacggggcgcctgtcgtcctccgagccgaacctgcagaacatt
cctatccgcactccggaaggccgccgcattcgccaggcctttatcgcgccggaaggctac
aaactgttggcggcggactattcccagatcgagctgcgaatcatggcgcatctgtctggc
gacaagggcctgctgagggccttcgaacatggtgaagacattcacaaagccaccgccgcc
gaggtcttcggcgtgagcctgatcgaggtcagctccgaccaacgccgcagcgccaaagcc
atcaactttggcctgatctacggcatgtctgctttcggcctggcccgccagctggaggtc
gaccgcaagaccgcccaggaatacatcgaccgctatttcgaacgttacccgggcgtactc
aaatacatggataacatccgcaaacaggcccacgacgatggctacgtggaaaccctgtac
ggccgccgcctgtacctgccggagatcaacgcccggaacaaacagctgcaacaggctgcc
gagcgcaccgccatcaacgcgcccatgcaaggtaccgcggccgacattatcaagcgggcg
atgatcgatgtggaccagtggctgcgctccgagcatgctgacgatgcctgcatgaccatg
caagtgcacgacgaattgatcatcgaagtacgagaagaagctctggagaccgtgcgcaag
ggcctggtgcagcgaatgcaggctgccgccaagctggacgtaccgttactggtagaagcc
ggcactggcgacaactgggaccaagctcactag
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