Marinobacter alkaliphilus: PBN92_02800
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Entry
PBN92_02800 CDS
T08753
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
mall
Marinobacter alkaliphilus
Pathway
mall03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mall00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PBN92_02800 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mall03019
]
PBN92_02800 (pcnB)
Enzymes [BR:
mall01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
PBN92_02800 (pcnB)
Messenger RNA biogenesis [BR:
mall03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
PBN92_02800 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Indigoidine_A
Motif
Other DBs
NCBI-ProteinID:
WBU41849
LinkDB
All DBs
Position
complement(632167..633537)
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AA seq
456 aa
AA seq
DB search
MPKRLVEKLRSFIPGNGKKKARRYQRQEIPRDQHTVSRSMISEPARKVLHRLNKAGYEAY
LVGGGVRDILLGGQPKDFDIATDATPEEVHDLFRNSRLIGRRFRIVHVVFGREIIEVTTF
RGNARDTEDEPAADEHRTSEHGLLLRDNVYGNQEEDALRRDFTINALYYCIRNFTIIDYA
NGVDDLKNRQIRLIGDPETRYREDPVRMLRAIRFAAKLGFEIEPDTEAPIRELAPLLTHI
PSARLFDEVLKLFSAGHGEATYDLLSEYGLLAPLFPETAKAIDAGESDELIRQALRNTDA
RIAQGKSVTPYFLFAAMLWPALQVEWRRRQDNGDPVQPALHGAIGKVIGRQVQATAIPKR
FSGPMKEIWEMQMRLPRRQGKRAFGTLAHPRFRAAYDFLLVRESAGEIEPGLGDWWTEFQ
RLDERGQEKMLSELGSASTPRKRRRKRSPVKRPPQA
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaacgacttgtagaaaaactacgctccttcattcccggcaacgggaaaaagaaa
gcccgacgctaccagcggcaggagatcccccgggatcagcacaccgtgtcccgctcgatg
atcagcgagcccgcacgaaaagtcctgcatcggctcaacaaagccggctatgaagcttat
ctggtgggcggcggcgtgcgcgacatcctcctgggcgggcagccaaaggatttcgacatt
gccaccgacgctacccctgaggaagttcacgacctgttccggaattcccgactgatcggg
cgccggttccggattgtgcatgtggtattcggccgggaaatcatcgaggtgaccactttc
aggggcaacgcccgggacaccgaagacgaaccggcagccgatgagcacagaaccagtgag
catggcctgctgttgcgggacaatgtctacggcaaccaggaagaagacgccctgcgccgt
gacttcactatcaacgcgctttactactgcatccgcaacttcacgatcatcgactacgcc
aacggcgttgacgatctgaaaaatcgccagatccgcctgatcggtgacccggaaacccgc
taccgggaagatccggttcgcatgcttcgcgccatccgctttgccgctaaactgggtttc
gaaattgaaccggacaccgaagctcccatccgggaactggcgccattgctgactcacatc
ccctcggcccggctgtttgatgaagtgctcaagctgttctcggcgggccatggcgaagct
acctacgacttgctcagcgagtacggcctactggcgcccttgttcccggaaaccgccaag
gccatcgacgccggggaatccgacgaactcattcgccaggcactgcgcaataccgacgcc
cggattgcccagggcaaatccgtcacgccttacttcctgtttgccgccatgctctggccg
gccctgcaagtggaatggcgccgccgccaggataatggcgacccggtgcagcccgccctt
catggcgccatcggcaaagtcattggccggcaggtgcaggccacagccattccgaaacgc
ttctcaggcccgatgaaagagatctgggaaatgcagatgcgcctgcccaggcgccagggc
aagcgagcttttggcacgctggcccacccgcgcttccgggctgcgtacgatttcctgctg
gtacgtgaatccgccggcgaaatcgaaccgggcctcggcgactggtggacggaattccag
cgcctggatgaacgcgggcaggaaaaaatgctgtctgagctaggctccgccagcaccccg
cgtaaacggcgccgcaaacgcagcccagtcaaaaggccaccccaagcatga
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