Marinobacter alkaliphilus: PBN92_03900
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Entry
PBN92_03900 CDS
T08753
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
mall
Marinobacter alkaliphilus
Pathway
mall02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
mall00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
PBN92_03900
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
mall02022
]
PBN92_03900
02035 Bacterial motility proteins [BR:
mall02035
]
PBN92_03900
Two-component system [BR:
mall02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
PBN92_03900
Bacterial motility proteins [BR:
mall02035
]
Pilus system
Twitching motility proteins
PBN92_03900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
VpsR
HTH_30
AAA_19
AAA_5
HTH_50
AAA_16
AAA_22
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
WBU42055
LinkDB
All DBs
Position
complement(860388..861773)
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AA seq
461 aa
AA seq
DB search
MTHQTALIVDDEPDIRDLLEITLTRMGITTYTAPDLTTARALLEQHKPQLCLTDMNLPDG
NGIDLVHWIQQHAPCTPVAVITAYGNMDTAIESLKAGAFDFVSKPVELPRLRELVNSALK
LSEPRNHDTAETDEPGLLLGESPQIRKLRNQTRKLARSQAPVFISGESGSGKELVARMIH
MQGPRADGPFIAVNCGAIPSELMESEFFGHKKGSFTGAVENKEGLFRSANGGTLFLDEVA
DLPLAMQVKLLRAIQEKAVRPVGDTKEVPVDIRVLSATHKNLPELVQEGSFRQDLFYRIN
VIELAVPPLRERAEDISLLADHILQRIAREYECDPAKLTPAAIDRLQGYDFPGNVRELEN
ILERAFTLCDEDLIDAADLHLGGGAIPGTPVSERSSDTGTSEAPAPVPEGEIDLEGFLEN
IERQAIEKALEATRWNKTAAAKRLGISFRALRYRLKKLGME
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atgacacaccaaacagcgctgattgttgacgacgaaccggatatccgggacttgctggaa
atcaccctcacccgcatggggattaccacctacaccgcaccggacctgactacagcccgg
gccttgcttgaacaacacaagccccagctgtgcctcaccgacatgaacctgcccgatggc
aatggcatagacctggtgcactggattcagcagcacgccccctgcacgccggtggccgtg
atcaccgcttacggcaacatggacacggctatcgaatccctgaaagccggcgctttcgac
tttgtctcaaaacccgtggaactgccccgcttgagggaactggtgaacagtgccctgaag
ctgagtgaacccagaaaccacgacactgccgaaaccgacgagccggggcttctgctcggt
gagtctccacaaatccgcaagctgcgaaaccagacccgtaagctggcccgcagccaggcg
ccggtgtttatcagcggcgaatccggcagtggtaaagagctggtcgcccgcatgatccac
atgcaggggccaagggccgatggcccctttattgccgttaactgcggcgccatcccttcg
gaactgatggaaagcgagttctttggccacaagaaaggcagctttaccggtgcggtcgaa
aacaaggagggcctgttccggagcgccaacggcggcaccctgttcctggacgaagtcgcc
gacctgcctctggccatgcaggtaaagctgctgcgcgccattcaggaaaaagccgtgcga
cccgtgggcgacaccaaggaagtgccggtggatatccgcgtactcagcgccacccacaaa
aacctgccggaactggtacaggaaggcagtttccgtcaggatctgttctaccgtattaac
gtgattgaactggcggtaccgcctctgcgcgagcgggcggaagacatttccctgctggcc
gaccatattctgcagcgcatcgcccgagagtacgaatgcgatccggccaaactaacgcca
gccgcaatagatcgcctgcagggatacgatttccccggcaacgtgcgggaactggaaaat
attctggagcgggcgtttacgctgtgtgatgaagatttgattgatgcggctgatttgcat
ctgggtggtggtgctatccccggaaccccggtatcggagcgcagctctgacaccggcaca
tcggaggctccggctcctgtgcctgagggggagatagacctggagggcttcctggagaac
atcgagcggcaggcgattgagaaggcgctggaggcaacccggtggaacaagacggcggcg
gccaagaggctggggatcagttttcgggcgttgaggtatcggttgaagaaattggggatg
gagtaa
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