Marinobacter alkaliphilus: PBN92_04845
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Entry
PBN92_04845 CDS
T08753
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
mall
Marinobacter alkaliphilus
Pathway
mall03410
Base excision repair
mall03430
Mismatch repair
mall03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mall00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PBN92_04845 (recJ)
03430 Mismatch repair
PBN92_04845 (recJ)
03440 Homologous recombination
PBN92_04845 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mall03400
]
PBN92_04845 (recJ)
DNA repair and recombination proteins [BR:
mall03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
PBN92_04845 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
PBN92_04845 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
PBN92_04845 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Glyco_transf_4
Motif
Other DBs
NCBI-ProteinID:
WBU42233
LinkDB
All DBs
Position
1061118..1062851
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AA seq
577 aa
AA seq
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MTPKKILRRPQPSDVTGWGQNLPPILRRLYAARGVQSDDQLQYTLKHLASPMQLRGIDRA
VELLAEAVAQKQRVMVLGDFDADGATSTAVAMLGLSMLGVAAIDFRVPSRFSDGYGLTPG
IIHRLQDEGDLPDLLVTVDNGISAIEGVRAARELGIKVVITDHHLAGDELPDADAIVNPN
QPGCPFLSKNAAGVGVMFYVLTALRKHLRDNNLLPDPEPNLGNLLDLVALGTVADVVPLD
HNNRIFVEQGIRRIRKGEARPGILALLEVAGRDYTEISATDLGFVVGPRLNAAGRLDDMS
IGIACLLADSRDEALRLARELDNFNRERRSIEKDMKTQAQDLLASMSLDIEGLPWGLALF
DQDWHQGVIGILAARIREQTHRPTIAFAPDDDGEHLKGSARSIPGLHIRDALAVVDAKNP
GLMKKYGGHAMAAGMTIVRDDLERFSNAFDQAVRDTLKAEDLEAAITTDGPLAPEELNLD
TAYLLKRAGPWGQHFPEPVFDGEFRVVSQRIVGENHLKLVLQPVDGGGIIDGIAFNTGPE
VPDFTRSGARVVYKPDANTFRGRTNLQLLVDYLEPLG
NT seq
1734 nt
NT seq
+upstream
nt +downstream
nt
atgactcctaaaaagatcctgcgtcgcccccagccgtccgatgtgacgggctggggacaa
aacctgccgcccatccttcgccgcctgtacgccgctcgcggtgtacagtccgacgatcag
ctccaatacaccctgaaacacctggcgtcgccgatgcagcttcgcggtattgatcgcgcg
gttgaactgctggccgaggccgttgcccagaagcaacgggtgatggtgctgggggatttc
gatgccgatggcgctaccagtactgccgtcgccatgctcggcttatccatgttgggcgtg
gctgcgatcgacttccgggtacccagccgcttctccgacggctacggcctgacgccgggc
atcattcaccggttgcaggacgaaggcgatttacccgacttgctcgttacggtcgataac
ggtatttccgccatcgaaggcgtgcgcgccgcccgggagttgggcatcaaagtggtcatc
accgatcaccacctggccggtgacgaactgccagacgccgatgccatcgttaaccccaac
cagcctggctgcccgttcctgagcaagaacgctgccggtgttggcgtgatgttctacgtg
ctcaccgccctgcgcaaacacctgcgggacaacaacctgctgccagacccggagcccaac
ctgggtaacctgctggacctggtggccctgggtaccgtggcagacgtagtaccgctggac
cacaacaaccggatttttgtagagcagggcatccgccgcatccgcaaaggcgaagcccga
ccgggcatcctggccctgctggaagtggctggccgcgactacaccgaaatcagcgctacg
gacctcggcttcgtggttggcccgcgcctgaacgccgccggccggctggacgacatgagc
atcggcatcgcctgcctgctcgccgacagccgcgacgaagccctgcgcctggcccgggaa
ctggacaacttcaaccgcgaacgccgcagcatcgaaaaagacatgaaaacccaggcccag
gacctgcttgcctccatgtccctcgacatcgaaggcctgccctggggcctggccctgttc
gaccaggactggcaccagggcgtgatcggcatcctggccgccagaatccgcgagcagacc
caccgccccaccatcgccttcgcccccgatgacgacggcgaacacctgaaaggctccgcc
cgctctatccccggcctgcacatccgcgacgctctggccgtggtagacgcgaaaaatcca
ggcctgatgaaaaaatacggcggccacgccatggccgccggcatgaccatcgtccgggac
gacctggaacgattcagcaacgccttcgaccaggccgtgcgcgataccttaaaggcggaa
gacctggaagccgccatcaccaccgacggacccctggccccggaagagttgaacctggac
accgcctacctgctcaaacgcgccggcccctgggggcagcacttccccgagccggtgttt
gacggcgaattccgggtagtgagccagcgcattgtgggcgagaaccatctgaagctggtg
ctgcagccggtggatggcggtggcatcattgatgggattgccttcaataccggcccggaa
gtgccagactttacccggagtggcgcgcgggtggtttataagccggatgcgaatacgttt
cgggggagaaccaatcttcagctgttggtggattatctggagccgttaggctga
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