Marinobacter alkaliphilus: PBN92_04860
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Entry
PBN92_04860 CDS
T08753
Symbol
ung
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
mall
Marinobacter alkaliphilus
Pathway
mall03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mall00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PBN92_04860 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mall03400
]
PBN92_04860 (ung)
Enzymes [BR:
mall01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
PBN92_04860 (ung)
DNA repair and recombination proteins [BR:
mall03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PBN92_04860 (ung)
Prokaryotic type
PBN92_04860 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
WBU42236
LinkDB
All DBs
Position
1065884..1066618
Genome browser
AA seq
244 aa
AA seq
DB search
MHPAEALAQQLKPGRGWDDWLADEFRQPYMLQLAEFLAAQEQAGKVLFPEQRHCFNALNS
TPLNQVKVVILGQDPYHGPGQAHGLCFSVRPGVPTPPSLVNIFKEIETDLAITPPDHGCL
QPWAEQGVLLLNAVLTVEQGNAGAHQNKGWETFTDKVIETVNREREGVVFLLWGSYARKK
GRHIDRNRHLVLEGPHPSPLSAYRGFFGCQHFSQANDWLQKQGIAQVDWALPDKVQLIQR
YAKS
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgcaccctgccgaggcactggctcaacaactgaagcccggccgcggctgggatgattgg
ctggcggacgagttccgtcagccctacatgctgcaactggccgaattcctggccgcccag
gaacaggcgggcaaagtactgttcccggagcagagacactgcttcaacgccctgaacagc
acaccgctgaaccaggtcaaagtcgtcatcctcggccaggacccctaccacggccccggc
caggcccacggcctctgcttctccgtccgaccgggcgtgcctacaccgccgtcgctggtg
aacatcttcaaagaaatcgaaaccgacctggccatcaccccgccagaccacggctgcctg
caaccctgggcagaacagggcgtattgctcctgaacgcggtgctcaccgtcgaacagggc
aacgccggtgcgcaccagaacaagggatgggaaaccttcaccgacaaagtaatcgaaacc
gtcaaccgggagcgggagggtgtggtgtttctgctctggggcagctacgccaggaagaaa
ggccggcacattgaccgcaatcgtcatctggttctggaaggaccgcacccgtcaccgctg
agtgcttatcgagggtttttcggttgtcagcacttctcgcaagctaatgactggctgcag
aaacagggaatagctcaagttgattgggctctgccagataaagtgcagcttatccagaga
tatgcgaagagctga
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