Marinobacter alkaliphilus: PBN92_05340
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Entry
PBN92_05340 CDS
T08753
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
mall
Marinobacter alkaliphilus
Brite
KEGG Orthology (KO) [BR:
mall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mall03016
]
PBN92_05340
Enzymes [BR:
mall01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
PBN92_05340
Transfer RNA biogenesis [BR:
mall03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PBN92_05340
Prokaryotic type
PBN92_05340
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Motif
Other DBs
NCBI-ProteinID:
WBU42327
LinkDB
All DBs
Position
complement(1170431..1171402)
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AA seq
323 aa
AA seq
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MEFTFLGTSAGTPTRSRNVTGLALSRSGPKPWYLIDCGEGTQHQLMRTRYSVMQLRAIFI
THIHGDHIFGLPGLLTSASMLGRTEPLDIIAPPQVRRFIDAVIENSDSSLSYPLNFINSE
APDFYWQDDRMGVTNVALSHRVACRAYVFTERNLERQLKQEKLAADGIEAGPAWGDLQKG
NDVLLDDGRLLKSDDYTHIPRTARRIIVGGDNDTPELLKEASQGTHVLIHEATYTQDVAD
RVGPWPQHSSAQQVARFAQSVKLPNLVLTHFSSRYQSVPGGTPHINQLAAEALQHYRGHL
FLAKDFDTYRLDKDLTLNKLDDH
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atggaatttactttcctgggcacatccgccggaacaccaacccggtcacgcaatgtcacc
ggactggccctgagccgctccggccccaaaccctggtacctgatcgactgcggtgagggt
acccagcaccaactgatgcgcacccggtattcggtgatgcagctacgtgccattttcatc
actcacatccatggcgaccatattttcggcctgcccggtctgctcaccagtgcctccatg
ctcggccgcacagaaccgctggatatcattgccccgccacaggtccgccgctttattgat
gcggtgattgaaaacagtgattcgagcctgagctacccgctgaacttcatcaactccgag
gcgccggatttctactggcaggatgaccgtatgggcgttaccaacgtggcgctctcccac
agggtagcctgccgggcctatgtttttaccgaaagaaatctggagcgccagttaaagcag
gagaaactggcggcggacggcatagaggctggcccggcctggggcgatctgcaaaagggc
aacgacgtgttgctggatgacggccggttactgaagagcgacgactacacgcacataccc
agaaccgcccggcgcatcattgtgggtggcgataacgacacaccggagcttctgaaagag
gccagccaaggcactcatgtactcatccacgaagccacttatacacaggacgtggccgac
cgggttggcccctggccccaacacagctcagcccaacaggtagcccgattcgcccagagc
gtgaaactgcctaacctggtgctgactcatttcagctcacgctaccagtcggtacctggc
ggcacgccccatattaatcaattggcagcggaggcgttacagcactacagaggccacctg
ttcctggccaaagatttcgatacctatcgtttggacaaagacctgacgctgaacaagctc
gatgaccactga
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