Marinobacter alkaliphilus: PBN92_10885
Help
Entry
PBN92_10885 CDS
T08753
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex subunit alpha FadB
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
mall
Marinobacter alkaliphilus
Pathway
mall00071
Fatty acid degradation
mall00280
Valine, leucine and isoleucine degradation
mall00310
Lysine degradation
mall00362
Benzoate degradation
mall00380
Tryptophan metabolism
mall00410
beta-Alanine metabolism
mall00640
Propanoate metabolism
mall00650
Butanoate metabolism
mall00907
Pinene, camphor and geraniol degradation
mall00930
Caprolactam degradation
mall01100
Metabolic pathways
mall01110
Biosynthesis of secondary metabolites
mall01120
Microbial metabolism in diverse environments
mall01200
Carbon metabolism
mall01212
Fatty acid metabolism
Module
mall_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
mall00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
PBN92_10885 (fadB)
00650 Butanoate metabolism
PBN92_10885 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
PBN92_10885 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
PBN92_10885 (fadB)
00310 Lysine degradation
PBN92_10885 (fadB)
00380 Tryptophan metabolism
PBN92_10885 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
PBN92_10885 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
PBN92_10885 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
PBN92_10885 (fadB)
00930 Caprolactam degradation
PBN92_10885 (fadB)
Enzymes [BR:
mall01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
PBN92_10885 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
PBN92_10885 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
PBN92_10885 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
PBN92_10885 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
Spidroin_N
DUF4354
Motif
Other DBs
NCBI-ProteinID:
WBU39613
LinkDB
All DBs
Position
complement(2404167..2406314)
Genome browser
AA seq
715 aa
AA seq
DB search
MIYEGKAITVKEIEGGIAQLDFDLQGESVNKFNRLTIEELGAAAEALKSQKNLKGLVVTS
SKDSFIVGADITEFTELFAGSEEDLVANNLKANEVFNAIEDLPFPTVTAINGIALGGGFE
MCLATDYRVMAPKAKVGLPEVKLGIFPGFGGTVRLSRLVGVDNAVEWIAGGTENRADAAL
KVGAVDAVVEADKLVAAAVAIINQCNEGKLDNLARREEKKGKIKLNAMESMMAFEISKAF
VAGKAGKNYPAPVEAIKTMQKHAGMTRDKAIEVEAKGFAKMAKTNVAACLVGLFLNDQAL
KKKASAWEKEASDVKLAAVLGAGIMGGGVAFQSALKGTPIVMKDINQDGIKLGLNEAKKL
LSKRVAKGKMDAGQMGDVLNNITPTLNYGDFKSVDLVVEAVVENPKVKDAVLRETEDAVR
EDTILTSNTSTISINLLAKNLKRPENFCGMHFFNPVHMMPLVEVIRGEKTSDRAIATTVA
YAKAMGKTPIVVNDCPGFLVNRVLFPYFGGFAALLRDGADFQKIDKVMEKFGWPMGPAYL
LDVVGMDTAKHANEVMAEGFPDRMKADFKSGIDVMFENNRYGQKNDKGFYKYEEDKKGKP
KKVVDEETYKLIEPVVNGSKDFDEEEIIARMMIPLCLETVRCLEDNIVEDPADADMGLIY
GIGFPPFRGGALRYIDDMGVDKFVELADKYADLGPLYAPTEKLREMAKTGKKFFG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgatttacgaaggtaaagccatcacggttaaagagatcgaaggcgggatcgctcagttg
gactttgacttgcagggcgagtcagttaacaagttcaaccgtctcaccatcgaagagctg
ggcgccgcagctgaagcactcaaatcccagaagaacctcaagggcctggtagtcaccagc
tccaaggacagctttattgtcggtgcggatatcaccgagttcactgagctgtttgcaggt
tccgaggaagacctcgttgctaacaacctgaaggcgaacgaagttttcaacgccatcgaa
gatctgccgttcccgacggttaccgctatcaacggtatcgctctgggcggtggttttgag
atgtgtctggccaccgactaccgtgtcatggctcccaaggccaaggttggtctgccggaa
gtgaagctgggtatcttcccgggctttggcggtactgtacgtctgtcccgtctggtgggt
gtggacaacgccgttgagtggattgccggtggtaccgaaaaccgtgccgatgccgctctg
aaggttggtgctgttgatgccgtggttgaagccgacaagctggtagccgctgccgttgcc
attatcaaccagtgcaacgaaggcaagctggataacctggcccgtcgtgaagagaagaaa
ggcaagatcaagctgaacgccatggaaagcatgatggcgttcgagatttccaaggcgttc
gtggccggcaaggctggcaagaactacccggcgccggtggaagccatcaagaccatgcag
aagcatgccggcatgactcgtgacaaggcgatcgaagtggaagccaaaggcttcgccaag
atggccaagaccaacgttgccgcgtgtctggttggtctgttcctgaacgaccaggccctg
aagaagaaagctagcgcctgggaaaaagaagcttccgacgtgaaactggctgcggtattg
ggcgctggtatcatgggtggcggtgtagcgttccagtctgcactgaaaggcaccccgatt
gtcatgaaggacatcaatcaggacggcatcaagctgggcctgaatgaagccaagaagctg
ctgtccaagcgtgttgccaagggcaagatggacgccggccagatgggcgacgttctgaac
aacatcacgccgaccctgaactacggtgatttcaagagcgtagatctggttgttgaagcg
gttgttgagaacccgaaggttaaagatgcggttctgcgtgaaactgaagacgcggttcgc
gaggacaccatcctgacgtccaacacctctaccatctccatcaaccttctggccaagaac
ctgaagcgtccggagaacttctgtggcatgcacttcttcaacccggtgcacatgatgccg
ctggttgaggttatccgtggcgagaagaccagtgaccgcgccatcgcgaccactgttgct
tacgccaaggccatgggcaagaccccgatcgtggtcaacgattgcccgggcttcctggtt
aaccgtgttctgttcccgtatttcggtggatttgccgcgctgctgcgtgacggtgctgat
ttccagaagatcgacaaggtgatggaaaagttcggctggcccatgggcccggcttacttg
ctcgacgttgtgggtatggacactgccaagcacgccaacgaggtgatggcagagggcttc
ccggatcgcatgaaggccgacttcaagtctggcattgacgtgatgttcgagaacaaccgt
tacggtcagaagaacgacaagggcttctacaagtacgaagaagacaagaagggcaagccg
aagaaagttgtcgacgaagaaacctacaagcttatcgagcctgtggttaacggcagcaag
gacttcgacgaagaagaaatcatcgcccgcatgatgattcctctgtgcctggaaaccgtt
cgctgcctggaagacaacattgttgaagacccggccgatgcagacatgggcctgatctac
ggtatcggtttccctccgttccgtggtggtgctctgcgctacatcgacgacatgggcgtc
gacaagttcgtcgaattggcagacaagtacgcagatcttggcccgctgtacgcgccgacc
gagaagctgcgtgaaatggccaagaccggcaagaagttctttggctaa
DBGET
integrated database retrieval system
