Marinobacter alkaliphilus: PBN92_11985
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Entry
PBN92_11985 CDS
T08753
Symbol
rpoS
Name
(GenBank) RNA polymerase sigma factor RpoS
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
mall
Marinobacter alkaliphilus
Brite
KEGG Orthology (KO) [BR:
mall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mall03021
]
PBN92_11985 (rpoS)
Transcription machinery [BR:
mall03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
PBN92_11985 (rpoS)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r3
Sigma70_r4
Sigma70_r1_2
7TMR-DISMED2
Motif
Other DBs
NCBI-ProteinID:
WBU39818
LinkDB
All DBs
Position
complement(2631098..2632096)
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AA seq
332 aa
AA seq
DB search
MSAEQEDIIIDRVADLDDADDHLLAEDKPEKPSADDSMAEAEDDFPTQGKYFTSQKQLDA
TQLYLNEIGFSPLLTPEEEVYFARLARKGEESGRKRMIESNLRLVVKIARRYVNRGLTLL
DLIEEGNLGLIRAVEKFDPERGFRFSTYATWWIRQTIERAIMNQTRTIRLPIHVVKELNL
YLRAARELTQKLDHEPTAEEIARMVDKPVADVKRMLGLNERVASMDTPIGAGSDKSLLDT
VADEGALDPADLLQDNNMCSCLEKWIDQLSDKQQEVLSRRFGLRGYPISTLEEVGQEIGL
TRERVRQIQVEALRRLREILEKEGLSGSLLFK
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcagagcaagaagacatcattattgatcgtgttgcagatctggatgacgcagac
gatcatctgttagcggaagacaaacctgaaaagccatcagcagacgactcgatggcagaa
gcggaagacgactttcccacccagggaaaatatttcaccagtcagaagcagctcgatgcc
acgcagctgtacctcaatgaaatcggtttctcaccactgctcactcccgaggaagaagtc
tacttcgcgcggctggcccgcaaaggcgaagagtctggccgtaagcgcatgattgaaagc
aacctgagactggttgtgaagatcgcccggcgctacgtgaatcgcggtctcaccctgctg
gacctgattgaagagggtaacctcgggctgatccgggctgttgaaaagttcgatccggaa
aggggcttccggttttcaacctacgccacctggtggattcgccagaccatagagcgggcg
atcatgaatcagacccgcaccatccgcctgcccattcacgtggtcaaggaactgaacctg
tatcttcgggcagcccgggagttgacccagaagctggaccacgagcccaccgccgaggaa
atagcccgcatggtggacaagccggtggcggatgtgaagcgcatgctcggcctgaatgag
cgcgtggcctccatggacacgccgattggcgcgggcagtgacaaatcgctgttggatacg
gtggccgacgaaggcgctctggacccggcggatctgctgcaggacaacaacatgtgttcc
tgcctggaaaagtggattgaccagctgagcgataaacagcaggaagtgctttcccgccgg
tttgggttgcgtggttaccccatcagtaccctggaggaggtgggccaggaaatcgggttg
acccgtgagagagtgcgccagatccaggttgaggcgttacggcgtctcagggaaattctg
gaaaaagaaggtttgtctggtagcttgctgtttaaatag
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