Marinobacter alkaliphilus: PBN92_13670
Help
Entry
PBN92_13670 CDS
T08753
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
mall
Marinobacter alkaliphilus
Brite
KEGG Orthology (KO) [BR:
mall00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mall03009
]
PBN92_13670 (rimO)
Enzymes [BR:
mall01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
PBN92_13670 (rimO)
Ribosome biogenesis [BR:
mall03009
]
Prokaryotic type
ribosomal protein modification factors
PBN92_13670 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
YajR_YAM
Matrix_Paramyxo_N
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
WBU40137
LinkDB
All DBs
Position
complement(3020990..3022330)
Genome browser
AA seq
446 aa
AA seq
DB search
MTEKIQDTAQGGKVGFISLGCPKALVDSERILTQLRLDGYEVVPTYNDADIVVVNTCGFI
DAAKQESLDAIGEAISENGKVIVTGCMGVEAEKIRETHPGVLAVSGPQAYEEVVGAVHQY
VPPKKDHDPFVDLVPPQGIKLTPRHYAYLKISEGCNHSCTFCIIPDMRGKLVSRPIGDVM
DEAKRLVDAGVKELLVISQDTSAYGVDIKYRTGFWQGRPVKTKMQSLCEALGEMGVWVRL
HYVYPYPHVDDIIPLMAEGKILPYLDIPFQHASPKVLKAMKRPAHDSKTLERIKTWREIC
PELTIRSTFIVGFPSETEEDFQYLLDWLDEAQLDRVGAFTYSPVEGARANELEGAVPEEV
KEERLARFMAKQAEISAARLQAKIGRTIDVLIDEVDEEGAIGRSKADAPEIDGMVYLNDE
TDLVPGQIVQAVVEHADEHDLWARLV
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgaccgagaaaatacaagacactgctcagggcggaaaagttggctttatcagcctgggg
tgccccaaagccctggtagactcagagcgtatcctgactcaattgcggctggatggttac
gaggtcgtgcccacctacaacgatgccgacattgtggtggttaacacctgtggttttatc
gatgcggccaagcaggaatccctggatgccatcggcgaagccatcagcgaaaacggcaag
gtgattgtgaccggttgtatgggcgtggaagcggagaagattcgcgagacccatccaggt
gtgctggcggtctctggtcctcaggcctatgaagaagttgtgggagcggtacaccagtat
gtaccgccgaagaaagaccacgacccattcgtggatctggtacccccgcagggcatcaag
cttacgccaaggcactatgcctacctgaagatatccgaaggctgtaaccacagctgtacc
ttctgcatcatcccggacatgcgcggcaaactggttagtcgcccgatcggtgatgtgatg
gatgaggcgaaacgactggtagacgctggcgttaaagagctgctggtgatctcccaggac
acctccgcctacggtgtggatatcaaataccgcaccggtttctggcagggccgcccggtg
aaaaccaagatgcagtccctatgtgaggctctgggtgagatgggcgtatgggttcgcttg
cactacgtctatccgtacccccatgtggacgacatcatcccgctgatggctgaaggcaag
atcctgccgtacctggacatcccgttccagcatgccagcccgaaagtgctcaaggccatg
aagcgcccggcccacgacagcaagaccctggagcgcatcaagacatggcgtgaaatctgt
ccggaactgaccattcgctcaacctttattgtcggcttccccagtgaaaccgaggaagat
tttcagtacctgctggactggctggatgaggcgcaactggaccgcgtgggtgcctttacc
tacagcccggttgaaggcgccagggcgaatgagctggaaggtgctgtgccggaagaggtc
aaggaagagcggctggcccgctttatggcgaagcaagcggagatttcagctgcccgattg
caggcgaaaatcggcaggacgattgacgtgctcatcgacgaggttgatgaagagggtgcg
attggtcgttcgaaggcggatgcgccggagattgatggcatggtttacctgaacgacgaa
accgacctggtccctggccagattgtgcaggctgttgtggagcacgccgacgaacatgac
ctttgggctcgtttggtctga
DBGET
integrated database retrieval system
